RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 DESI2Q9BSY9 194 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 WRAP53Q9BUR4 548 aaKnown RBP28.45■■■□□ 2.14
SSBP4-206ENST00000599699 LACRTQ9GZZ8 138 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 TSPAN11A1L157 253 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 BTNL10A8MVZ5 291 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 H0Y8X5 98 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 MATN3O15232 486 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 MAGEC1O60732 1142 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 CD59P13987 128 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 CCNCP24863 283 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 ELP6Q0PNE2 266 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 HNRNPDQ14103 355 aaKnown RBP28.44■■■□□ 2.14
SSBP4-206ENST00000599699 PRAMEF14Q5SWL7 426 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 SLC9A4Q6AI14 798 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 IQCHQ86VS3 1027 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 KLHDC7BQ96G42 594 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 TSGA13Q96PP4 275 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 NOD2Q9HC29 1040 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 PCDH12Q9NPG4 1184 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 HAUS2Q9NVX0 235 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 TTLL3Q9Y4R7 772 aa28.44■■■□□ 2.14
SSBP4-206ENST00000599699 KNL1Q8NG31 2342 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 DFNA5O60443 496 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 MMP20O60882 483 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 CSRP1P21291 193 aaKnown RBP28.43■■■□□ 2.14
SSBP4-206ENST00000599699 CLDN2P57739 230 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 NXPH1P58417 271 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 OVGP1Q12889 678 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 FGL2Q14314 439 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 ZNF423Q2M1K9 1284 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 CCDC50Q8IVM0 306 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 TMEM145Q8NBT3 493 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 PDCD6IPQ8WUM4 868 aaKnown RBP28.43■■■□□ 2.14
SSBP4-206ENST00000599699 C1QTNF2Q9BXJ5 285 aa28.43■■■□□ 2.14
SSBP4-206ENST00000599699 RBM22Q9NW64 420 aaKnown RBP eCLIP28.43■■■□□ 2.14
SSBP4-206ENST00000599699 ASCC3Q8N3C0 2202 aaKnown RBP28.43■■■□□ 2.14
SSBP4-206ENST00000599699 PJA2O43164 708 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 ZRANB2O95218 330 aaKnown RBP eCLIP28.42■■■□□ 2.14
SSBP4-206ENST00000599699 PRKCGP05129 697 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 ZNF883P0CG24 379 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 CDKN2BP42772 138 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 CCT8P50990 548 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 POLR2LP62875 67 aaKnown RBP28.42■■■□□ 2.14
SSBP4-206ENST00000599699 KIF5AQ12840 1032 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 LLGL1Q15334 1064 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 KAZNQ674X7 775 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 ZSWIM9Q86XI8 627 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 CCDC13Q8IYE1 715 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 KATNAL2Q8IYT4 538 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.42■■■□□ 2.14
SSBP4-206ENST00000599699 TEX26Q8N6G2 289 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 SETD7Q8WTS6 366 aaKnown RBP28.42■■■□□ 2.14
SSBP4-206ENST00000599699 MAML1Q92585 1016 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 HDAC11Q96DB2 347 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 ATP8A1Q9Y2Q0 1164 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 PCDHGC4Q9Y5F7 938 aa28.42■■■□□ 2.14
SSBP4-206ENST00000599699 GIPC1O14908 333 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 SH3BP5O60239 455 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 THEGLP0DJG4 465 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 CCNB1P14635 433 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 CR2P20023 1033 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 MARCKSL1P49006 195 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 FAM193AP78312 1265 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 IL9RQ01113 521 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 TFDP2Q14188 446 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 SUZ12Q15022 739 aaKnown RBP28.41■■■□□ 2.14
SSBP4-206ENST00000599699 NPNTQ6UXI9 565 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 SPOCD1Q6ZMY3 1216 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 PIP4P1Q86T03 277 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 NAXDQ8IW45 347 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 RCOR2Q8IZ40 523 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 KIAA1524Q8TCG1 905 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 NSMCE3Q96MG7 304 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 LGMNQ99538 433 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 ELF4Q99607 663 aaPredicted RBP28.41■■■□□ 2.14
SSBP4-206ENST00000599699 POLR1EQ9GZS1 481 aaKnown RBP28.41■■■□□ 2.14
SSBP4-206ENST00000599699 CNOT1A5YKK6 2376 aaKnown RBP28.41■■■□□ 2.14
SSBP4-206ENST00000599699 CACNA1AO00555 2505 aa28.41■■■□□ 2.14
SSBP4-206ENST00000599699 MACROD2A1Z1Q3 448 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 RIOK3O14730 519 aaKnown RBP28.4■■■□□ 2.14
SSBP4-206ENST00000599699 RAD51BO15315 384 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 TM7SF2O76062 418 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 KRT10P13645 584 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 CEACAM1P13688 526 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 SEMG2Q02383 582 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 AP1B1Q10567 949 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 PDK1Q15118 436 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 TMEM52BQ4KMG9 183 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 RALGPS1Q5JS13 557 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 GCNT7Q6ZNI0 430 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 PTAR1Q7Z6K3 402 aaPredicted RBP28.4■■■□□ 2.14
SSBP4-206ENST00000599699 KRT35Q92764 455 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 FATE1Q969F0 183 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 ECHDC3Q96DC8 303 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 RBM41Q96IZ5 413 aaKnown RBP28.4■■■□□ 2.14
SSBP4-206ENST00000599699 SEMA3CQ99985 751 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 C1QTNF7Q9BXJ2 289 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 HS3ST3A1Q9Y663 406 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 SHROOM3Q8TF72 1996 aa28.4■■■□□ 2.14
SSBP4-206ENST00000599699 TRPM6Q9BX84 2022 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms