RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 HADHAP40939 763 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 PGFP49763 221 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 CDKL1Q00532 357 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 DSC2Q02487 901 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 IQSEC1Q6DN90 963 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 C4orf22Q6V702 233 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 NOL11Q9H8H0 719 aaKnown RBP11.31□□□□□ -0.6
ZNF544-213ENST00000599227 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 IPO11Q9UI26 975 aaKnown RBP11.31□□□□□ -0.6
ZNF544-213ENST00000599227 PSMD13Q9UNM6 376 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 COPG1Q9Y678 874 aaKnown RBP11.31□□□□□ -0.6
ZNF544-213ENST00000599227 MYO10Q9HD67 2058 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 HACD1B0YJ81 288 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 CTPS1P17812 591 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 CCND3P30281 292 aaPredicted RBP11.31□□□□□ -0.6
ZNF544-213ENST00000599227 RGS2P41220 211 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 DPP6P42658 865 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 MTTPP55157 894 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 CDH17Q12864 832 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 LIPMQ5VYY2 423 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 ITPRIPL1Q6GPH6 555 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 AAGABQ6PD74 315 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 TIFABQ6ZNK6 161 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 HEXDCQ8WVB3 486 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 JADE3Q92613 823 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 SMOQ99835 787 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 RAP2CQ9Y3L5 183 aa11.31□□□□□ -0.6
ZNF544-213ENST00000599227 RNF103-CHMP3A0A140T963 221 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 TBKBP1A7MCY6 615 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 H3BSA7 217 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 ZNF195O14628 629 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 CREB5Q02930 508 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 CAPRIN1Q14444 709 aaKnown RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 C6orf10Q5SRN2 563 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 KIAA0319Q5VV43 1072 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 ZDHHC17Q8IUH5 632 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 LILRA2Q8N149 483 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 FAM110BQ8TC76 370 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 HSFY1Q96LI6 401 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 TMEM79Q9BSE2 394 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 RTKNQ9BST9 563 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 CDH23Q9H251 3354 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 SPTBN2O15020 2390 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 PRR23AA6NEV1 266 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 E7ENX8 843 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 NR5A2O00482 541 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 GPR39O43194 453 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 MLNP12872 115 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 KCNA5P22460 613 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 HARS2P49590 506 aaKnown RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 FASTKQ14296 549 aaKnown RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 USP50Q70EL3 339 aaPredicted RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 DQX1Q8TE96 717 aaKnown RBP11.3□□□□□ -0.6
ZNF544-213ENST00000599227 KLHL32Q96NJ5 620 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 C1orf21Q9H246 121 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 VRTNQ9H8Y1 702 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 OXSMQ9NWU1 459 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 C5orf42Q9H799 3197 aa11.3□□□□□ -0.6
ZNF544-213ENST00000599227 LRRC14BA6NHZ5 514 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 J3KR12 359 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 PDLIM1O00151 329 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 RNASEH2AO75792 299 aaKnown RBP11.29□□□□□ -0.6
ZNF544-213ENST00000599227 CNTN5O94779 1100 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 ALDH1A2O94788 518 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 GABRB3P28472 473 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 GRIA3P42263 894 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 PSME3P61289 254 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 PRKAA1Q13131 559 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 DDX39BQ13838 428 aaKnown RBP11.29□□□□□ -0.6
ZNF544-213ENST00000599227 ARHGAP22Q7Z5H3 698 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 C14orf80Q86SX3 495 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 CNTD1Q8N815 330 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 HDAC10Q969S8 669 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 GMIPQ9P107 970 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 SORCS3Q9UPU3 1222 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 MGAMO43451 1857 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 GVINP1Q7Z2Y8 2422 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 ARHGEF37A1IGU5 675 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 SUPT3HB4E1H0 165 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 H3BNX3 289 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 MATN2O00339 956 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 PRRG1O14668 218 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 RTN3O95197 1032 aaPredicted RBP11.29□□□□□ -0.6
ZNF544-213ENST00000599227 MPOP05164 745 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 PSMC3P17980 439 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 FMO4P31512 558 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 SLC1A2P43004 574 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 USP46P62068 366 aa11.29□□□□□ -0.6
ZNF544-213ENST00000599227 STEAP4Q687X5 459 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms