RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 MFSD6LQ8IWD5 586 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 CMTM8Q8IZV2 173 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 SLC35F6Q8N357 371 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 C17orf53Q8N3J3 647 aaPredicted RBP10.66□□□□□ -0.7
SMG9-207ENST00000598860 TMEM105Q8N8V8 129 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 ATP6V0D2Q8N8Y2 350 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 PCDH19Q8TAB3 1148 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 DEPDC1BQ8WUY9 529 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 SLC39A13Q96H72 371 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 FCRL2Q96LA5 508 aaPredicted RBP10.66□□□□□ -0.7
SMG9-207ENST00000598860 DCLK3Q9C098 648 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 WDCPQ9H6R7 721 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 BRD9Q9H8M2 597 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 PIGVQ9NUD9 493 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 ERVK13-1Q9NX77 482 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 ARHGEF38Q9NXL2 777 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 LSM7Q9UK45 103 aaKnown RBP10.66□□□□□ -0.7
SMG9-207ENST00000598860 NUDT5Q9UKK9 219 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 ZNF510Q9Y2H8 683 aa10.66□□□□□ -0.7
SMG9-207ENST00000598860 SHROOM3Q8TF72 1996 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 MIA3Q5JRA6 1907 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 SYNJ2BP-COX16A0A087WUM0 186 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 HEPACAM2A8MVW5 462 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 MSI1O43347 362 aaKnown RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 TBX18O95935 607 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 FTCDO95954 541 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 GDI1P31150 447 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 CETN2P41208 172 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 HARS2P49590 506 aaKnown RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 PITX1P78337 314 aaPredicted RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 SLC25A11Q02978 314 aaKnown RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 RPS6KA1Q15418 735 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 MLF2Q15773 248 aaPredicted RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 ODF2Q5BJF6 829 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 SCYL2Q6P3W7 929 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 VITQ6UXI7 678 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 LHFPL2Q6ZUX7 228 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 FAM131BQ86XD5 332 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 VSIG1Q86XK7 387 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 YAF2Q8IY57 180 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 ARFGAP1Q8N6T3 406 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 ARL14EPQ8N8R7 260 aaPredicted RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 PRSS33Q8NF86 280 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 OR2W6PQ8NHA6 318 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 CD101Q93033 1021 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 AZIN2Q96A70 460 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 HES6Q96HZ4 224 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 RBM41Q96IZ5 413 aaKnown RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 BTN2A3PQ96KV6 586 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 C16orf45Q96MC5 204 aaPredicted RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 NELL2Q99435 816 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 NAPGQ99747 312 aaPredicted RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 DDX50Q9BQ39 737 aaKnown RBP10.65□□□□□ -0.7
SMG9-207ENST00000598860 SLC46A2Q9BY10 475 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 RNF38Q9H0F5 515 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 GOLPH3Q9H4A6 298 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 OBP2AQ9NY56 170 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 COX16Q9P0S2 106 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 COQ6Q9Y2Z9 468 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 SH3BP1Q9Y3L3 701 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 CPQQ9Y646 472 aa10.65□□□□□ -0.7
SMG9-207ENST00000598860 CACNA1HO95180 2353 aa10.65□□□□□ -0.71
SMG9-207ENST00000598860 KMT2EQ8IZD2 1858 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 F5P12259 2224 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 CTAGE9A4FU28 777 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 CBX4O00257 560 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 STC2O76061 302 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 TCP1P17987 556 aaKnown RBP10.64□□□□□ -0.71
SMG9-207ENST00000598860 CASQ1P31415 396 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 HTR7P34969 479 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 ADRA1BP35368 520 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 SLC11A2P49281 568 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 RWDD2BP57060 319 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 NHLH1Q02575 133 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 STAT4Q14765 748 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 PDK2Q15119 407 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 ZFYVE27Q5T4F4 411 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 ERMARDQ5T6L9 678 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 MAP7D3Q8IWC1 876 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 KATNAL2Q8IYT4 538 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 CELF5Q8N6W0 485 aaKnown RBP10.64□□□□□ -0.71
SMG9-207ENST00000598860 DNASE1L2Q92874 299 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 USP7Q93009 1102 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 HAPLN3Q96S86 360 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 SNRNP25Q9BV90 132 aaKnown RBP10.64□□□□□ -0.71
SMG9-207ENST00000598860 TKTL2Q9H0I9 626 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 CARD9Q9H257 536 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 TDP1Q9NUW8 608 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 RCOR3Q9P2K3 495 aaPredicted RBP10.64□□□□□ -0.71
SMG9-207ENST00000598860 PCSK1NQ9UHG2 260 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 FZD10Q9ULW2 581 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 G3BP2Q9UN86 482 aaKnown RBP10.64□□□□□ -0.71
SMG9-207ENST00000598860 ZNF281Q9Y2X9 895 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 HYOU1Q9Y4L1 999 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 PCDHA3Q9Y5H8 950 aa10.64□□□□□ -0.71
SMG9-207ENST00000598860 KANSL1LA0AUZ9 987 aa10.63□□□□□ -0.71
SMG9-207ENST00000598860 E2F8A0AVK6 867 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms