RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RB1P06400 928 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 AVPR1AP37288 418 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 NCALDP61601 193 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 STX3Q13277 289 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 USP10Q14694 798 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF789Q5FWF6 425 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 Q6ZNB5 142 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 TMC8Q8IU68 726 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 IFT43Q96FT9 208 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 LRRC37BQ96QE4 947 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 CINPQ9BW66 212 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 MUC3BQ9H195 1237 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 COPG2Q9UBF2 871 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 OBSL1O75147 1896 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 GFRA2O00451 464 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 ITM2AO43736 263 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 SNAP91O60641 907 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 DNAJC8O75937 253 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 PAPSS2O95340 614 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 CD160O95971 181 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 C1RP00736 705 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 SERPINF2P08697 491 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 PIRTP0C851 137 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 ARF5P84085 180 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 CREMQ03060 361 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF460Q14592 562 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 PTPRCAPQ14761 206 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 UGP2Q16851 508 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 PABPC1LQ4VXU2 614 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 ATG14Q6ZNE5 492 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 TMC7Q7Z402 723 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 CEP97Q8IW35 865 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 MAB21L3Q8N8X9 362 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 TRIB3Q96RU7 358 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 DDX50Q9BQ39 737 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 FAM167BQ9BTA0 163 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 TMEM120AQ9BXJ8 343 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 CHD7Q9P2D1 2997 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 LYPLA1O75608 230 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 DCTN3O75935 186 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 SLC35E2BP0CK96 405 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 GJA1P17302 382 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 CR2P20023 1033 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 MZF1P28698 734 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 HADHAP40939 763 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 SCNN1BP51168 640 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ERVFC1P60507 584 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 DBN1Q16643 649 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 HSF5Q4G112 596 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ARMC3Q5W041 872 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 CNSTQ6PJW8 725 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 LINGO4Q6UY18 593 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 RAPH1Q70E73 1250 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 SPNS2Q8IVW8 549 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 BBS5Q8N3I7 341 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 CARNMT1Q8N4J0 409 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 WFDC5Q8TCV5 224 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 BHMTQ93088 406 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 RASSF4Q9H2L5 321 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 FBXO6Q9NRD1 293 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ASB3Q9Y575 518 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ARL5AQ9Y689 179 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 FAM95CA0A1B0GW59 222 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 OR51F1A6NGY5 319 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 H0YHG0 523 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 BUD23O43709 281 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 LATS1O95835 1130 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 EPOP01588 193 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 C8AP07357 584 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 CPA3P15088 417 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 HLA-DPA1P20036 260 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ARFIP2P53365 341 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 SETDB1Q15047 1291 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 CCDC153Q494R4 210 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 PTAR1Q7Z6K3 402 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 MTDHQ86UE4 582 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 PPP1R14CQ8TAE6 165 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 BLOC1S5Q8TDH9 187 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 HDAC10Q969S8 669 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 LRCH3Q96II8 777 aa17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 MARCOQ9UEW3 520 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-216ENST00000598201 CDH23Q9H251 3354 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 G3V2L1 256 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 H0Y626 953 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 ZMPSTE24O75844 475 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 LRG1P02750 347 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 FGF1P05230 155 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 MYL2P10916 166 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 ARRB2P32121 409 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 CD151P48509 253 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 RFTN1Q14699 578 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 FBXW10Q5XX13 1052 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 KREMEN2Q8NCW0 462 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 TMA16Q96EY4 203 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 490.5 ms