RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 KCNF1Q9H3M0 494 aa15.13■□□□□ 0.01
SCN1B-204ENST00000596348 LZTFL1Q9NQ48 299 aa15.13■□□□□ 0.01
SCN1B-204ENST00000596348 RBM22Q9NW64 420 aaKnown RBP eCLIP15.13■□□□□ 0.01
SCN1B-204ENST00000596348 TMEM131Q92545 1883 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 A0A1B0GVT2 93 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 UPK3BL1B0FP48 263 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 UPK3BL2E5RIL1 263 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 CDX4O14627 284 aaPredicted RBP15.12■□□□□ 0.01
SCN1B-204ENST00000596348 JCHAINP01591 159 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 WNT1P04628 370 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 PRKCGP05129 697 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 TGM2P21980 687 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 PTPN7P35236 360 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 MAPK8P45983 427 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 AFF3P51826 1226 aaKnown RBP15.12■□□□□ 0.01
SCN1B-204ENST00000596348 COPS2P61201 443 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 IFI35P80217 286 aaPredicted RBP15.12■□□□□ 0.01
SCN1B-204ENST00000596348 DSC2Q02487 901 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 BCL2L1Q07817 233 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 AP1B1Q10567 949 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 TRAF2Q12933 501 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 GRIK2Q13002 908 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 PRKD1Q15139 912 aaPredicted RBP15.12■□□□□ 0.01
SCN1B-204ENST00000596348 BRAT1Q6PJG6 821 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 BBS5Q8N3I7 341 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 CNTD1Q8N815 330 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 OR2I1PQ8NGU4 316 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 HCAR2Q8TDS4 363 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 HES6Q96HZ4 224 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 IL12RB2Q99665 862 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 SEMA3CQ99985 751 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 CEP41Q9BYV8 373 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 OSBPL8Q9BZF1 889 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 PCDH12Q9NPG4 1184 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 SCUBE2Q9NQ36 999 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 TPX2Q9ULW0 747 aaKnown RBP15.12■□□□□ 0.01
SCN1B-204ENST00000596348 CA5BQ9Y2D0 317 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 PPP2R2CQ9Y2T4 447 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 PCDHGC4Q9Y5F7 938 aa15.12■□□□□ 0.01
SCN1B-204ENST00000596348 A0A1W2PR77 199 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 MIF4GDA9UHW6 222 aaKnown RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 PRR5-ARHGAP8B1AHC4 643 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 ARHGAP33O14559 1287 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 PPP1R12AO14974 1030 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 SLC31A1O15431 190 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 HTRA2O43464 458 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 TSPAN6O43657 245 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 GRIA4P48058 902 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 NR2C2P49116 596 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 RPS21P63220 83 aaKnown RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 RACK1P63244 317 aaKnown RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 SEMG2Q02383 582 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 NIPAL4Q0D2K0 466 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 ZNF211Q13398 564 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 UGP2Q16851 508 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 RSPO4Q2I0M5 234 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 SETMARQ53H47 684 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 STPG1Q5TH74 334 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 NAPEPLDQ6IQ20 393 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 KIAA1161Q6NSJ0 714 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 PRPF39Q86UA1 669 aaKnown RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 ARRDC2Q8TBH0 407 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 SPOCK2Q92563 424 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 RMDN1Q96DB5 314 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 MYOCQ99972 504 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 POLR1EQ9GZS1 481 aaKnown RBP15.11■□□□□ 0.01
SCN1B-204ENST00000596348 FZD3Q9NPG1 666 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 AMACRQ9UHK6 382 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 DMTF1Q9Y222 760 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 ATP8A1Q9Y2Q0 1164 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 TTLL3Q9Y4R7 772 aa15.11■□□□□ 0.01
SCN1B-204ENST00000596348 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.1■□□□□ 0.01
SCN1B-204ENST00000596348 IGLON5A6NGN9 336 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 C4orf47A7E2U8 309 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 APOC4-APOC2K7ER74 178 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 NEMP1O14524 444 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 RAD51BO15315 384 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 NRDCO43847 1150 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 SOCS5O75159 536 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 APOC2P02655 101 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 NUDT1P36639 197 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 MMP12P39900 470 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 LIMK1P53667 647 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 ITKQ08881 620 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 RALGPS1Q5JS13 557 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 CFAP58Q5T655 872 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 TMEM145Q8NBT3 493 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 NETO1Q8TDF5 533 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 P3H4Q92791 437 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 FEM1CQ96JP0 617 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 WRAP53Q9BUR4 548 aaKnown RBP15.1■□□□□ 0.01
SCN1B-204ENST00000596348 GTPBP2Q9BX10 602 aaKnown RBP15.1■□□□□ 0.01
SCN1B-204ENST00000596348 C1QTNF2Q9BXJ5 285 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 BRD8Q9H0E9 1235 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 TMEM9BQ9NQ34 198 aa15.1■□□□□ 0.01
SCN1B-204ENST00000596348 AASDHPPTQ9NRN7 309 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms