RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KDM7AQ6ZMT4 941 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 ARHGAP36Q6ZRI8 547 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 HSPH1Q92598 858 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 DUSP23Q9BVJ7 150 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 MBNL1Q9NR56 388 aaKnown RBP23.7■■□□□ 1.38
LSM4-204ENST00000594828 KLF15Q9UIH9 416 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 TDRD6O60522 2096 aaKnown RBP23.7■■□□□ 1.38
LSM4-204ENST00000594828 WDFY3Q8IZQ1 3526 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 A0A087X0T9 212 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 NEBLO76041 1014 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 FAM228BP0C875 321 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 CKMT1AP12532 417 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 TCF4P15884 667 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 JUNDP17535 347 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 IGFALSP35858 605 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 RGRP47804 291 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 YPEL5P62699 121 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 NSUN2Q08J23 767 aaKnown RBP eCLIP23.69■■□□□ 1.38
LSM4-204ENST00000594828 TARDBPQ13148 414 aaKnown RBP eCLIP23.69■■□□□ 1.38
LSM4-204ENST00000594828 ERAP2Q6P179 960 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 TP53I13Q8NBR0 393 aaPredicted RBP23.69■■□□□ 1.38
LSM4-204ENST00000594828 ZNF548Q8NEK5 533 aaPredicted RBP23.69■■□□□ 1.38
LSM4-204ENST00000594828 APOLD1Q96LR9 279 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 ATP13A3Q9H7F0 1226 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 PCDH12Q9NPG4 1184 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 IP6K2Q9UHH9 426 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 CSNK1G3Q9Y6M4 447 aa23.69■■□□□ 1.38
LSM4-204ENST00000594828 K7ESM1 405 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 TOR1BO14657 336 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 RIOK3O14730 519 aaKnown RBP23.68■■□□□ 1.38
LSM4-204ENST00000594828 RARAP10276 462 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 AMPD1P23109 780 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 SERPINA4P29622 427 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 EIF2B5Q13144 721 aaKnown RBP23.68■■□□□ 1.38
LSM4-204ENST00000594828 ZSCAN23Q3MJ62 389 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 ALKBH5Q6P6C2 394 aaKnown RBP23.68■■□□□ 1.38
LSM4-204ENST00000594828 POLNQ7Z5Q5 900 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 TP53INP2Q8IXH6 220 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 BTN2A2Q8WVV5 523 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 RFFLQ8WZ73 363 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 BTBD6Q96KE9 485 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 NUP85Q9BW27 656 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.68■■□□□ 1.38
LSM4-204ENST00000594828 ANAPC7Q9UJX3 599 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 RALYQ9UKM9 306 aaKnown RBP23.68■■□□□ 1.38
LSM4-204ENST00000594828 COQ6Q9Y2Z9 468 aa23.68■■□□□ 1.38
LSM4-204ENST00000594828 GOLGA4Q13439 2230 aaKnown RBP23.67■■□□□ 1.38
LSM4-204ENST00000594828 AQP9O43315 295 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 GYPCP04921 128 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 CYP1A2P05177 515 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 EIF4A3P38919 411 aaKnown RBP23.67■■□□□ 1.38
LSM4-204ENST00000594828 RENBPP51606 427 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 INSM1Q01101 510 aaPredicted RBP23.67■■□□□ 1.38
LSM4-204ENST00000594828 BCL2L1Q07817 233 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 LRRC14Q15048 493 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 CCDC122Q5T0U0 273 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 TMCO3Q6UWJ1 677 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 ZSWIM9Q86XI8 627 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 CACTIN-AS1Q8N1I8 211 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 NIPA2Q8N8Q9 360 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 FAM181AQ8N9Y4 354 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 EVA1BQ9NVM1 165 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 SEPT3Q9UH03 358 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 CLCA2Q9UQC9 943 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 RAXQ9Y2V3 346 aa23.67■■□□□ 1.38
LSM4-204ENST00000594828 ZFHX4Q86UP3 3567 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 MYF5P13349 255 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 C6P13671 934 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 CASP14P31944 242 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 SCNN1BP51168 640 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 DUSP3P51452 185 aaPredicted RBP23.66■■□□□ 1.38
LSM4-204ENST00000594828 LBRQ14739 615 aaKnown RBP23.66■■□□□ 1.38
LSM4-204ENST00000594828 IRF4Q15306 451 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 TXNRD3NBQ6F5E7 133 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 PAF1Q8N7H5 531 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 LMX1AQ8TE12 382 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 TEKT4Q8WW24 435 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 ZNF599Q96NL3 588 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 CSPG4P5Q96PW8 444 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 PSKH2Q96QS6 385 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 USP29Q9HBJ7 922 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 ETNK2Q9NVF9 386 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 SPASTQ9UBP0 616 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 ATP8A1Q9Y2Q0 1164 aa23.66■■□□□ 1.38
LSM4-204ENST00000594828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.66■■□□□ 1.383e-6■■■□□ 18.4
LSM4-204ENST00000594828 MYO1FO00160 1098 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 MUSKO15146 869 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 LZTS3O60299 673 aaPredicted RBP23.65■■□□□ 1.38
LSM4-204ENST00000594828 PRKCGP05129 697 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 TPM3P06753 285 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 MMP12P39900 470 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 LIG3P49916 1009 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 POLR2LP62875 67 aaKnown RBP23.65■■□□□ 1.38
LSM4-204ENST00000594828 SEMG2Q02383 582 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 SLC10A7Q0GE19 358 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 WSCD2Q2TBF2 565 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 FAXCQ5TGI0 409 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 TMCO4Q5TGY1 634 aa23.65■■□□□ 1.38
LSM4-204ENST00000594828 ZCCHC8Q6NZY4 707 aaKnown RBP23.65■■□□□ 1.38
LSM4-204ENST00000594828 ECHDC3Q96DC8 303 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms