RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 GANCQ8TET4 914 aa17.24■□□□□ 0.35
LTBP4-209ENST00000594116 QKIQ96PU8 341 aaKnown RBP eCLIP17.24■□□□□ 0.35
LTBP4-209ENST00000594116 CDC6Q99741 560 aa17.24■□□□□ 0.35
LTBP4-209ENST00000594116 SPON2Q9BUD6 331 aa17.24■□□□□ 0.35
LTBP4-209ENST00000594116 TUBB2BQ9BVA1 445 aa17.24■□□□□ 0.35
LTBP4-209ENST00000594116 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
LTBP4-209ENST00000594116 SLCO3A1Q9UIG8 710 aa17.24■□□□□ 0.35
LTBP4-209ENST00000594116 MRFAP1Q9Y605 127 aa17.24■□□□□ 0.35
LTBP4-209ENST00000594116 A0A1W2PP55 124 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 A0A1W2PPC4 97 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 ZSCAN5CA6NGD5 496 aaPredicted RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 MCF2LO15068 1137 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 LIASO43766 372 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 SNAP91O60641 907 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 PEX11BO96011 259 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 CCNCP24863 283 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 PAFAH1B1P43034 410 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 EIF3EP60228 445 aaKnown RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 ELAVL3Q14576 367 aaKnown RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 SUZ12Q15022 739 aaKnown RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 CCNG2Q16589 344 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 CYP1B1Q16678 543 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 TIGD7Q6NT04 549 aaPredicted RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 NCEH1Q6PIU2 408 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 MMAAQ8IVH4 418 aaKnown RBP17.23■□□□□ 0.35
LTBP4-209ENST00000594116 PRELID2Q8N945 189 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 OR2T34Q8NGX1 318 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 FAM129BQ96TA1 746 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 FAM118BQ9BPY3 351 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 NEUROG2Q9H2A3 272 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 SP110Q9HB58 689 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 HPCAL4Q9UM19 191 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 PLXNB3Q9ULL4 1909 aa17.23■□□□□ 0.35
LTBP4-209ENST00000594116 ITPR1Q14643 2758 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 LRRC72A6NJI9 287 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 SRRM3A6NNA2 597 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 J3KR12 359 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 CBX4O00257 560 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 VILLO15195 856 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 PCDHGA12O60330 932 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 RNASEH2AO75792 299 aaKnown RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 CD160O95971 181 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 ADH1BP00325 375 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 RBP3P10745 1247 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 VAV1P15498 845 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 C5AR1P21730 350 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 SLC8A1P32418 973 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 NNMTP40261 264 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 CTSKP43235 329 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 CCT8P50990 548 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 OASLQ15646 514 aaKnown RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 WHAMMP3Q1A5X7 153 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 SLC45A4Q5BKX6 768 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 RETSATQ6NUM9 610 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 LAYNQ6UX15 382 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 ZNF572Q7Z3I7 529 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 SLCO6A1Q86UG4 719 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 ZC3H18Q86VM9 953 aaKnown RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 ZNF354CQ86Y25 554 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 CDKL3Q8IVW4 592 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 CCDC13Q8IYE1 715 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 PNPLA1Q8N8W4 532 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 RHBDD1Q8TEB9 315 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 TFB1MQ8WVM0 346 aaKnown RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 ATG4AQ8WYN0 398 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 MAML1Q92585 1016 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 PTPRN2Q92932 1015 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 RPL10LQ96L21 214 aaKnown RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 ZNF599Q96NL3 588 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 LGMNQ99538 433 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 OMDQ99983 421 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 TOR4AQ9NXH8 423 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 DNPEPQ9ULA0 475 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
LTBP4-209ENST00000594116 HS3ST2Q9Y278 367 aa17.22■□□□□ 0.35
LTBP4-209ENST00000594116 GOLGA6L10A0A0M3HER8 536 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 KRIT1O00522 736 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 DFNA5O60443 496 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 ZNF189O75820 626 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 DKK1O94907 266 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 PSMD8P48556 350 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 NUMBP49757 651 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 STK19P49842 368 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 SERPINH1P50454 418 aaKnown RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 CCR5P51681 352 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 CKAP4Q07065 602 aaKnown RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 RFTN1Q14699 578 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 STK40Q8N2I9 435 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 AADATQ8N5Z0 425 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 CCNYQ8ND76 341 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 C1orf54Q8WWF1 131 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 CASKIN2Q8WXE0 1202 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 AP1M1Q9BXS5 423 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 UBA2Q9UBT2 640 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-209ENST00000594116 SLC25A13Q9UJS0 675 aa17.21■□□□□ 0.35
LTBP4-209ENST00000594116 BTBD3Q9Y2F9 522 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms