RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 BRAT1Q6PJG6 821 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 Q6ZSR6 202 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 LRRC49Q8IUZ0 686 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 OXR1Q8N573 874 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 ATPAF2Q8N5M1 289 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 PQLC3Q8N755 202 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 FAM174AQ8TBP5 190 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 CENPTQ96BT3 561 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 CNTNAP3BQ96NU0 1288 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 CDC6Q99741 560 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 CNTNAP3Q9BZ76 1288 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 ATP13A3Q9H7F0 1226 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 CAAP1Q9H8G2 361 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 PCDH12Q9NPG4 1184 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 ASPMQ8IZT6 3477 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 A6NNZ2 444 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 RIOK3O14730 519 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 ITGAVP06756 1048 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 ATXN1LP0C7T5 689 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 FTH1P19P0C7X4 201 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 KDELR1P24390 212 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 GALNT2Q10471 571 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 KYAT3Q6YP21 454 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 KDM7AQ6ZMT4 941 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 MAP7D3Q8IWC1 876 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 PNPLA1Q8N8W4 532 aa18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 WRAP53Q9BUR4 548 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-202ENST00000593764 C3orf70A6NLC5 250 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 HYAL3O43820 417 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 TM7SF2O76062 418 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 DKK1O94907 266 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 PRKCGP05129 697 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 SERPINA4P29622 427 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 GARSP41250 739 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 AP1S1P61966 158 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 BCL2L1Q07817 233 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 ELP6Q0PNE2 266 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 SLC10A2Q12908 348 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 RAB44Q7Z6P3 723 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 CHCHD4Q8N4Q1 142 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 TEX26Q8N6G2 289 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 DENND6BQ8NEG7 585 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 CXorf40AQ8TE69 158 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 MGME1Q9BQP7 344 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 SCNM1Q9BWG6 230 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 SHROOM3Q8TF72 1996 aa18.64■□□□□ 0.57
SHKBP1-202ENST00000593764 ANKRD36A6QL64 1941 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 FPGTO14772 594 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TNFSF14O43557 240 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TRIM16O95361 564 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 MAP3K6O95382 1288 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 FECHP22830 423 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 XPAP23025 273 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 HSPA9P38646 679 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 MMP12P39900 470 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 MAGEA1P43355 309 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 PFN3P60673 137 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 SEMG2Q02383 582 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 ZNF235Q14590 738 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TPRG1LQ5T0D9 272 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 MARC1Q5VT66 337 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 LRRC38Q5VT99 294 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 PTAR1Q7Z6K3 402 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 DCP2Q8IU60 420 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 CCDC170Q8IYT3 715 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 SLC25A45Q8N413 288 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TP53I13Q8NBR0 393 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 ADAMTS14Q8WXS8 1223 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 SPOCK2Q92563 424 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TSGA13Q96PP4 275 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 RNF157Q96PX1 679 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 PANX2Q96RD6 677 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 NUDCD1Q96RS6 583 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 NOD2Q9HC29 1040 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 MBNL1Q9NR56 388 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TFR2Q9UP52 801 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 APOBEC2Q9Y235 224 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 ATP8A1Q9Y2Q0 1164 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 COQ6Q9Y2Z9 468 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 PCDHGC4Q9Y5F7 938 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 AKAP13Q12802 2813 aa18.63■□□□□ 0.57
SHKBP1-202ENST00000593764 TDRD6O60522 2096 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 SPTY2D1-AS1A0A0U1RR47 76 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 ZNF487B1APH4 448 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 HTRA2O43464 458 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 SDC3O75056 442 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 IGFALSP35858 605 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 MMP13P45452 471 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 RABIFP47224 123 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 HADHBP55084 474 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 MAXP61244 160 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 GBE1Q04446 702 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 FZD2Q14332 565 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 INAVAQ3KP66 663 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 CFAP58Q5T655 872 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 EID2Q8N6I1 236 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 MAML1Q92585 1016 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 IFT43Q96FT9 208 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 HYOU1Q9Y4L1 999 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 PCDHA13Q9Y5I0 950 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms