RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DEKP35659 375 aaKnown RBP5.2□□□□□ -1.58
SMAD4-216ENST00000593223 PTPN9P43378 593 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 KCNJ4P48050 445 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 POLD2P49005 469 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 WASHC5Q12768 1159 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 TBL3Q12788 808 aaKnown RBP5.2□□□□□ -1.58
SMAD4-216ENST00000593223 NAA25Q14CX7 972 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 LEXMQ3ZCV2 418 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 SPECC1Q5M775 1068 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 Q5PR19 223 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 ASPHD1Q5U4P2 390 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 ATG16L1Q676U5 607 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 GJB7Q6PEY0 223 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 MAATS1Q7Z4T9 603 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 LRRTM4Q86VH4 590 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 LCA5Q86VQ0 697 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 NKAIN3Q8N8D7 197 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 DNAAF1Q8NEP3 725 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 HDAC7Q8WUI4 952 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 INPP5DQ92835 1189 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 CCDC47Q96A33 483 aaKnown RBP5.2□□□□□ -1.58
SMAD4-216ENST00000593223 CHMP4BQ9H444 224 aaKnown RBP5.2□□□□□ -1.58
SMAD4-216ENST00000593223 SIRT3Q9NTG7 399 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-216ENST00000593223 TTLL3Q9Y4R7 772 aa5.2□□□□□ -1.58
SMAD4-216ENST00000593223 CFAP65Q6ZU64 1925 aaKnown RBP5.2□□□□□ -1.58
SMAD4-216ENST00000593223 COL22A1Q8NFW1 1626 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 ADCY9O60503 1353 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 CACNA1IQ9P0X4 2223 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 RPS10-NUDT3A0A1W2PQS6 291 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 SH2D7A6NKC9 451 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 C17orf100A8MU93 164 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 K7ENM7 598 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 RNMTO43148 476 aaKnown RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 TOMM70O94826 608 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 POLBP06746 335 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 FGF2P09038 288 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 PSMA3P25788 255 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 YWHAQP27348 245 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 PGM1P36871 562 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 TSPAN7P41732 249 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 DPP6P42658 865 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 ENTPD1P49961 510 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 P2RX3P56373 397 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 CHRNDQ07001 517 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 LVRNQ6Q4G3 990 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 Q6ZTK2 550 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 RSRC2Q7L4I2 434 aaKnown RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 TECPR1Q7Z6L1 1165 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 CPOQ8IVL8 374 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 SETD9Q8NE22 299 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 C7orf57Q8NEG2 295 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 HERVK_113Q902F9 699 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 HSPH1Q92598 858 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 CNOT9Q92600 299 aaKnown RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 MAELQ96JY0 434 aaKnown RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 POLDIP3Q9BY77 421 aaKnown RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 RBM38Q9H0Z9 239 aaKnown RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 TAOK3Q9H2K8 898 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 CXorf56Q9H5V9 222 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 ENTPD7Q9NQZ7 604 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 GRHL1Q9NZI5 618 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 NLKQ9UBE8 527 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 FBXO40Q9UH90 709 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 CNPY2Q9Y2B0 182 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 TROQ12816 1431 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-216ENST00000593223 PREX2Q70Z35 1606 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 KAT6BQ8WYB5 2073 aa5.19□□□□□ -1.58
SMAD4-216ENST00000593223 RRN3P2A6NIE6 340 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 CYP1A2P05177 515 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 AVPR1AP37288 418 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 PIK3CAP42336 1068 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 RXRGP48443 463 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 GPR18Q14330 331 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 ODF3L2Q3SX64 289 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 NAPEPLDQ6IQ20 393 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 HEPHL1Q6MZM0 1159 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 C16orf54Q6UWD8 224 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 BBS12Q6ZW61 710 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 CTU1Q7Z7A3 348 aaKnown RBP5.18□□□□□ -1.58
SMAD4-216ENST00000593223 SERPINA11Q86U17 422 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 PALB2Q86YC2 1186 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 OR8H2Q8N162 312 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 ZNF366Q8N895 744 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 KDM1BQ8NB78 822 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 IL17REQ8NFR9 667 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 GABPB2Q8TAK5 448 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-216ENST00000593223 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 ATOH1Q92858 354 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-216ENST00000593223 USP13Q92995 863 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-216ENST00000593223 WDR77Q9BQA1 342 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-216ENST00000593223 KRCC1Q9NPI7 259 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-216ENST00000593223 SH3GLB2Q9NR46 395 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 NCKIPSDQ9NZQ3 722 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 HDAC6Q9UBN7 1215 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 EFCAB6Q5THR3 1501 aa5.18□□□□□ -1.58
SMAD4-216ENST00000593223 MAP3K5Q99683 1374 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 ADGRB2O60241 1585 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 PIK3C2BO00750 1634 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 FAM90A10PA6NDY2 464 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 HSPB6O14558 160 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms