RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SPINT1O43278 529 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 LRP3O75074 770 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 NDUFS2O75306 463 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF217O75362 1048 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PMPCBO75439 489 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 GCATO75600 419 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 LEFTY1O75610 366 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 TMEM63AO94886 807 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ECEL1O95672 775 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 IGSF6O95976 241 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 GSRP00390 522 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 UGT2B4P06133 528 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PDHA1P08559 390 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CTAGE8P0CG41 777 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ACADMP11310 421 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ITPKAP23677 461 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ID4P47928 161 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 TPMTP51580 245 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 GPS1Q13098 491 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CAMK2GQ13555 558 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 GALNT3Q14435 633 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 RFTN1Q14699 578 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 MYLK3Q32MK0 819 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 AASDHQ4L235 1098 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 INO80DQ53TQ3 878 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PLA2G2CQ5R387 149 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 LYSMD4Q5XG99 296 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 KDELC1Q6UW63 502 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ARHGEF18Q6ZSZ5 1173 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 SRLQ86TD4 932 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CTAGE6Q86UF2 777 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CTAGE4Q8IX94 777 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PCDH20Q8N6Y1 951 aaKnown RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CCDC89Q8N998 374 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 IPMKQ8NFU5 416 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 OR2T3Q8NH03 318 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 NSMCE1Q8WV22 266 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 FATE1Q969F0 183 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 IMP4Q96G21 291 aaKnown RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 TOE1Q96GM8 510 aaKnown RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 HSPA12BQ96MM6 686 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 GDAP1L1Q96MZ0 367 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 NUDCD1Q96RS6 583 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 FRMD8P1Q9BZ68 369 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CEP44Q9C0F1 390 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 POLR1EQ9GZS1 481 aaKnown RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 DPH5Q9H2P9 285 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ETNK1Q9HBU6 452 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ITM2CQ9NQX7 267 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 VPS45Q9NRW7 570 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 TMEM74BQ9NUR3 256 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PCYOX1Q9UHG3 505 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 GGT7Q9UJ14 662 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CDV3Q9UKY7 258 aaKnown RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 ITM2BQ9Y287 266 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 DRG1Q9Y295 367 aaKnown RBP9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PCDHGA5Q9Y5G8 931 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 DNAH14Q0VDD8 3507 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 CFAP69A5D8W1 941 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 CCDC188H7C350 402 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 MID1O15344 667 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 TP73O15350 636 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 OPHN1O60890 802 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 NEBLO76041 1014 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 AGTP01019 485 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF806P0C7X5 589 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 PIRTP0C851 137 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 MAOBP27338 520 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 CD6P30203 668 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ABL2P42684 1182 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 RENBPP51606 427 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 RPS14P62263 151 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF33AQ06730 810 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 PTK6Q13882 451 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 NAA30Q147X3 362 aaPredicted RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 PPP1R7Q15435 360 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 P3H1Q32P28 736 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 TEX35Q5T0J7 233 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ALG1LQ6GMV1 187 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 SLC36A4Q6YBV0 504 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF534Q76KX8 674 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 PARS2Q7L3T8 475 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 LRRC49Q8IUZ0 686 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 SLC41A1Q8IVJ1 513 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 GSPT2Q8IYD1 628 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 AADATQ8N5Z0 425 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ATL2Q8NHH9 583 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 GANCQ8TET4 914 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 PDCD6IPQ8WUM4 868 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 TADA1Q96BN2 335 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 MRGPRX2Q96LB1 330 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 KLHL32Q96NJ5 620 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 FICDQ9BVA6 458 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 GPR174Q9BXC1 333 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 TDRD1Q9BXT4 1180 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 SLC25A51Q9H1U9 297 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 PCDH9Q9HC56 1237 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms