RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 DENND5AQ6IQ26 1287 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 ESRP1Q6NXG1 681 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 LPCAT2Q7L5N7 544 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 C2CD4AQ8NCU7 369 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 GRIN3AQ8TCU5 1115 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 SLC16A10Q8TF71 515 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 PTCD2Q8WV60 388 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 COLEC11Q9BWP8 271 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 EML4Q9HC35 981 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 IGSF5Q9NSI5 407 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 OR12D3Q9UGF7 316 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 CROTQ9UKG9 612 aa14.98□□□□□ -0.01
SMARCA4-219ENST00000592604 CXCL11O14625 94 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 NDST2P52849 883 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 MAP3K7CLP57077 242 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 PFKPQ01813 784 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 RALGDSQ12967 914 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 LPIN1Q14693 890 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF772Q68DY9 489 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 SGF29Q96ES7 293 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 ELMO2Q96JJ3 720 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 FCRL5Q96RD9 977 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CIB1Q99828 191 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 NOL11Q9H8H0 719 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CLK4Q9HAZ1 481 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CDHR5Q9HBB8 845 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 ARMC1Q9NVT9 282 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 TUBA8Q9NY65 449 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CCDC167Q9P0B6 97 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CNOT6Q9ULM6 557 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 GINS2Q9Y248 185 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 NEMP2A6NFY4 417 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 NRP2O60462 931 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 F9P00740 461 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 SLC1A2P43004 574 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 COG7P83436 770 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CDC42EP1Q00587 391 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 TECRLQ5HYJ1 363 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 PM20D1Q6GTS8 502 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 ZBTB49Q6ZSB9 765 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 TFAP2CQ92754 450 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 GOLGA2P5Q9HBQ8 144 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 TNFRSF12AQ9NP84 129 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 CNGB3Q9NQW8 809 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 DDIT4Q9NX09 232 aa14.97□□□□□ -0.01
SMARCA4-219ENST00000592604 MRASO14807 208 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 LRIG2O94898 1065 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 HDCP19113 662 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 FGFR3P22607 806 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 CXCR3P49682 368 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 POU6F1Q14863 301 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 CUZD1Q86UP6 607 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 FIBCD1Q8N539 461 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 SPATA22Q8NHS9 363 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 ADAMTS16Q8TE57 1224 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 UNKQ9C0B0 810 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 VTA1Q9NP79 307 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 KLK14Q9P0G3 267 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 TCAF1Q9Y4C2 921 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 PLOD2O00469 737 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 GABRDO14764 452 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 GPC4O75487 556 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 ANXA9O76027 345 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 IPO13O94829 963 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 NCAM1P13591 858 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 EPHX2P34913 555 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 ACADVLP49748 655 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 ATP4BP51164 291 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 PRKCQQ04759 706 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 KCTD21Q4G0X4 260 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 DCLRE1AQ6PJP8 1040 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 CYP2R1Q6VVX0 501 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 DHFR2Q86XF0 187 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 WDCPQ9H6R7 721 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 VPS45Q9NRW7 570 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 TREX1Q9NSU2 369 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 PTBP2Q9UKA9 531 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 SNX10Q9Y5X0 201 aa14.96□□□□□ -0.01
SMARCA4-219ENST00000592604 A8MT66 165 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 SRP72O76094 671 aaKnown RBP14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 KCNA5P22460 613 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 CCNCP24863 283 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 GALK1P51570 392 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 PPP1R3AQ16821 1122 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 FAM83EQ2M2I3 478 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 RAB41Q5JT25 222 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 KIAA0319Q5VV43 1072 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 DLK2Q6UY11 383 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 ERMP1Q7Z2K6 904 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 PACRGLQ8N7B6 248 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 MFSD2AQ8NA29 543 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 MIPOL1Q8TD10 442 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 ZUFSPQ96AP4 578 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 MED10Q9BTT4 135 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 ELP3Q9H9T3 547 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 FBXO5Q9UKT4 447 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms