RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TPCN2Q8NHX9 752 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 KIAA1524Q8TCG1 905 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 NUDCD1Q96RS6 583 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 ORAI3Q9BRQ5 295 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 WRAP53Q9BUR4 548 aaKnown RBP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 GOLPH3Q9H4A6 298 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 IL21RQ9HBE5 538 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 FZD3Q9NPG1 666 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 RBM22Q9NW64 420 aaKnown RBP eCLIP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 SEPT10Q9P0V9 454 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 ZFR2Q9UPR6 939 aaKnown RBP10.17□□□□□ -0.78
BRCA1-227ENST00000591849 ITM2BQ9Y287 266 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 CA5BQ9Y2D0 317 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 DOCK4Q8N1I0 1966 aa10.17□□□□□ -0.78
BRCA1-227ENST00000591849 NUMA1Q14980 2115 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 A0A1W2PR77 199 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 MACROD2A1Z1Q3 448 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 TTC24A2A3L6 582 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 ZNF487B1APH4 448 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 H0Y8X5 98 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 WNT9AO14904 365 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 PPP1R12AO14974 1030 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 SH3BP5O60239 455 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 WNT1P04628 370 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 ITGAVP06756 1048 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 CCNB1P14635 433 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 CSRP1P21291 193 aaKnown RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 CA4P22748 312 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 CES1P23141 567 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 CTSKP43235 329 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 EPHB1P54762 984 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 CLDN2P57739 230 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 BNC1Q01954 994 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 AP1B1Q10567 949 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 LLGL1Q15334 1064 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 UGP2Q16851 508 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 INAVAQ3KP66 663 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 RALGPS1Q5JS13 557 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 PRAMEF14Q5SWL7 426 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 ARMC12Q5T9G4 340 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 MFSD7Q6UXD7 560 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 SPOCD1Q6ZMY3 1216 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 PTAR1Q7Z6K3 402 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 IQCHQ86VS3 1027 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 VSIG1Q86XK7 387 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 OXR1Q8N573 874 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 FAM174AQ8TBP5 190 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 RHBDD1Q8TEB9 315 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 LRRN4Q8WUT4 740 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 FAF2Q96CS3 445 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 RBM41Q96IZ5 413 aaKnown RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 TSGA13Q96PP4 275 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 DESI2Q9BSY9 194 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 POLR1EQ9GZS1 481 aaKnown RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 PCDH12Q9NPG4 1184 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 DTLQ9NZJ0 730 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 FNDC3AQ9Y2H6 1198 aaKnown RBP10.16□□□□□ -0.78
BRCA1-227ENST00000591849 ATP8A1Q9Y2Q0 1164 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 PCDHGC4Q9Y5F7 938 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 HS3ST3A1Q9Y663 406 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 DUSP10Q9Y6W6 482 aa10.16□□□□□ -0.78
BRCA1-227ENST00000591849 PLXND1Q9Y4D7 1925 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CEP295Q9C0D2 2601 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 RCCD1A6NED2 376 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 GOLGA6L3A6NEY3 463 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 A6NNZ2 444 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 BTNL10A8MVZ5 291 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 A8MX80 341 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 TM4SF5O14894 197 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 MUSKO15146 869 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 YKT6O15498 198 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CST8O60676 142 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CPP00450 1065 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 JCHAINP01591 159 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 PRKCGP05129 697 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 ADRB1P08588 477 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 ZNF883P0CG24 379 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CEACAM1P13688 526 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CD59P13987 128 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 ITIH2P19823 946 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 NXPH1P58417 271 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 IL9RQ01113 521 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 SLC10A2Q12908 348 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-227ENST00000591849 ZNF423Q2M1K9 1284 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 TMEM52BQ4KMG9 183 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 HS1BP3Q53T59 392 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 NPNTQ6UXI9 565 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 Q6ZSR6 202 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 PEX26Q7Z412 305 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 DCP2Q8IU60 420 aaKnown RBP10.15□□□□□ -0.78
BRCA1-227ENST00000591849 NAXDQ8IW45 347 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 KATNAL2Q8IYT4 538 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 SYCE1Q8N0S2 351 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 PLD5Q8N7P1 536 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CCDC112Q8NEF3 446 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 EXD1Q8NHP7 514 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 ASB12Q8WXK4 309 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 P3H4Q92791 437 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms