RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TMEM139Q8IV31 216 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 NAXDQ8IW45 347 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 BBS5Q8N3I7 341 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 PGBD5Q8N414 524 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 TEX26Q8N6G2 289 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 NSMCE3Q96MG7 304 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 CAMK1GQ96NX5 476 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 TSGA13Q96PP4 275 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 ELF4Q99607 663 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 MYOCQ99972 504 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 MGME1Q9BQP7 344 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 MAK16Q9BXY0 300 aaKnown RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 GOLPH3Q9H4A6 298 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 PCDH12Q9NPG4 1184 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 DTLQ9NZJ0 730 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 SALL4Q9UJQ4 1053 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 REXO2Q9Y3B8 237 aaKnown RBP9.28□□□□□ -0.92
DNMT1-223ENST00000591239 PCDHGB2Q9Y5G2 931 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 DUSP10Q9Y6W6 482 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 CABIN1Q9Y6J0 2220 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 PCNX2A6NKB5 2137 aa9.28□□□□□ -0.92
DNMT1-223ENST00000591239 A0A1B0GTQ1 180 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 TRAFD1O14545 582 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 MATN3O15232 486 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 RAD51BO15315 384 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 PSTPIP1O43586 416 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 MMP20O60882 483 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 THEGLP0DJG4 465 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ZFXP17010 805 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 CR2P20023 1033 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 MX2P20592 715 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 CLDN2P57739 230 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 MAXP61244 160 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 POLR2LP62875 67 aaKnown RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 IL9RQ01113 521 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ELP6Q0PNE2 266 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 SUZ12Q15022 739 aaKnown RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 N4BP2L1Q5TBK1 243 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 SLC9A4Q6AI14 798 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 C11orf63Q6NUN7 778 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ERAP2Q6P179 960 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 DBX2Q6ZNG2 339 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ABI3BPQ7Z7G0 1075 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 DAAM2Q86T65 1068 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ZSWIM9Q86XI8 627 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 SPATS2Q86XZ4 545 aaKnown RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 PAF1Q8N7H5 531 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 PLD5Q8N7P1 536 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 CCNYQ8ND76 341 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ACRBPQ8NEB7 543 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 OR13H1Q8NG92 308 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 TPCN2Q8NHX9 752 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 CXorf40AQ8TE69 158 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ASB12Q8WXK4 309 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 MAML1Q92585 1016 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 FATE1Q969F0 183 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 HDAC11Q96DB2 347 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ECHDC3Q96DC8 303 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 KLHDC7BQ96G42 594 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 BMFQ96LC9 184 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 LENG8Q96PV6 779 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 NUDCD1Q96RS6 583 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 WRAP53Q9BUR4 548 aaKnown RBP9.27□□□□□ -0.93
DNMT1-223ENST00000591239 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ERVMER34-1Q9H9K5 563 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 NOD2Q9HC29 1040 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 NT5MQ9NPB1 228 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 SCUBE2Q9NQ36 999 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 PCDHGC4Q9Y5F7 938 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 HEY1Q9Y5J3 304 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 HS3ST3A1Q9Y663 406 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 TMEM131Q92545 1883 aa9.27□□□□□ -0.93
DNMT1-223ENST00000591239 ASPMQ8IZT6 3477 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 SHROOM3Q8TF72 1996 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 POM121BA6NF01 834 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 A6NNZ2 444 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 BTNL10A8MVZ5 291 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 GOLGA6L6A8MZA4 724 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 APOL1O14791 398 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 FLRT2O43155 660 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 PJA2O43164 708 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 HTRA2O43464 458 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-223ENST00000591239 PCDHGA12O60330 932 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 CBFA2T3O75081 653 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 SOCS5O75159 536 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 TM7SF2O76062 418 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.93
DNMT1-223ENST00000591239 PRKCGP05129 697 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 ADRB1P08588 477 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 CCNB1P14635 433 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 MMP12P39900 470 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 CDKN2BP42772 138 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 RXRGP48443 463 aa9.26□□□□□ -0.93
DNMT1-223ENST00000591239 ARRB1P49407 418 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-223ENST00000591239 CCT8P50990 548 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 251.2 ms