RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 KLF15Q9UIH9 416 aa21.56■■□□□ 1.04
LRP3-202ENST00000590275 PCDHB9Q9Y5E1 797 aa21.56■■□□□ 1.04
LRP3-202ENST00000590275 HS3ST3A1Q9Y663 406 aa21.56■■□□□ 1.04
LRP3-202ENST00000590275 CEP295Q9C0D2 2601 aa21.56■■□□□ 1.04
LRP3-202ENST00000590275 NEMP1O14524 444 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 DFNA5O60443 496 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 GIMD1P0DJR0 217 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 SCNN1BP51168 640 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 MAXP61244 160 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 GBE1Q04446 702 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 NSUN2Q08J23 767 aaKnown RBP eCLIP21.55■■□□□ 1.04
LRP3-202ENST00000590275 RALGDSQ12967 914 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 HNRNPDQ14103 355 aaKnown RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 FZD2Q14332 565 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 SUZ12Q15022 739 aaKnown RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 PTPRRQ15256 657 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 TSR1Q2NL82 804 aaKnown RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 KYAT3Q6YP21 454 aaKnown RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 MARCH9Q86YJ5 346 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 TP53I13Q8NBR0 393 aaPredicted RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 KCTD6Q8NC69 237 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 ASB12Q8WXK4 309 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 ZNF641Q96N77 438 aaPredicted RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 ZNF599Q96NL3 588 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 TUBGCP5Q96RT8 1024 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 SEPT3Q9UH03 358 aa21.55■■□□□ 1.04
LRP3-202ENST00000590275 TP53BP1Q12888 1972 aaPredicted RBP21.55■■□□□ 1.04
LRP3-202ENST00000590275 RIOK3O14730 519 aaKnown RBP21.54■■□□□ 1.04
LRP3-202ENST00000590275 ITGAVP06756 1048 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 GM2AP17900 193 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 PFN3P60673 137 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 GALNT2Q10471 571 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 TCEAL1Q15170 157 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 PTAR1Q7Z6K3 402 aaPredicted RBP21.54■■□□□ 1.04
LRP3-202ENST00000590275 EID2Q8N6I1 236 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 HCAR2Q8TDS4 363 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 RFFLQ8WZ73 363 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 FUBP1Q96AE4 644 aaKnown RBP21.54■■□□□ 1.04
LRP3-202ENST00000590275 MGME1Q9BQP7 344 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 ZNF670Q9BS34 389 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 GOLPH3Q9H4A6 298 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 NOD2Q9HC29 1040 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 PCDHGC4Q9Y5F7 938 aa21.54■■□□□ 1.04
LRP3-202ENST00000590275 GOLGA8CPA6NN73 597 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 A6NNZ2 444 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 KDELR1P24390 212 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 MMP12P39900 470 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 DNAJC3Q13217 504 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 ATPAF2Q8N5M1 289 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 TEX26Q8N6G2 289 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 ADAMTS14Q8WXS8 1223 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 MRFAP1L1Q96HT8 127 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 SALL4Q9UJQ4 1053 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 ACACBO00763 2458 aa21.53■■□□□ 1.04
LRP3-202ENST00000590275 RCCD1A6NED2 376 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 C1QTNF9BB2RNN3 333 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 TRIM38O00635 465 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 LCA5LO95447 670 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 C1QTNF9P0C862 333 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 C6P13671 934 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 GARSP41250 739 aaKnown RBP21.52■■□□□ 1.04
LRP3-202ENST00000590275 ARRB1P49407 418 aaPredicted RBP21.52■■□□□ 1.04
LRP3-202ENST00000590275 TRAF2Q12933 501 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 SGCGQ13326 291 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 PDK2Q15119 407 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 WSCD2Q2TBF2 565 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 BRAT1Q6PJG6 821 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 CXorf40AQ8TE69 158 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 GATA6Q92908 595 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 RNF157Q96PX1 679 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 SMIM14Q96QK8 99 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 CDC6Q99741 560 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 ATP13A3Q9H7F0 1226 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 ATP8A1Q9Y2Q0 1164 aa21.52■■□□□ 1.04
LRP3-202ENST00000590275 TRPM6Q9BX84 2022 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 TPRP12270 2363 aaKnown RBP21.51■■□□□ 1.03
LRP3-202ENST00000590275 HTRA2O43464 458 aaPredicted RBP21.51■■□□□ 1.03
LRP3-202ENST00000590275 TNFSF14O43557 240 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 MAGEC1O60732 1142 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 TM7SF2O76062 418 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 KRT7P08729 469 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 FECHP22830 423 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 DGKAP23743 735 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 SERPINA4P29622 427 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 SERPINB6P35237 376 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 LIG3P49916 1009 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 CLDN6P56747 220 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 BCL2L1Q07817 233 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 EIF2B5Q13144 721 aaKnown RBP21.51■■□□□ 1.03
LRP3-202ENST00000590275 GRM3Q14832 879 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 IRF4Q15306 451 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 KCTD16Q68DU8 428 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 RHOT2Q8IXI1 618 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 PELI3Q8N2H9 469 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 PLD5Q8N7P1 536 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 DENND6BQ8NEG7 585 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 MAML1Q92585 1016 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 NUDCD1Q96RS6 583 aa21.51■■□□□ 1.03
LRP3-202ENST00000590275 TCEAL2Q9H3H9 227 aaPredicted RBP21.51■■□□□ 1.03
LRP3-202ENST00000590275 DTLQ9NZJ0 730 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms