RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 MSANTD4Q8NCY6 345 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 WFIKKN2Q8TEU8 576 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 DDX1Q92499 740 aaKnown RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 PEX11GQ96HA9 241 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 DEPDC7Q96QD5 511 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 SGPP1Q9BX95 441 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 SIK2Q9H0K1 926 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 CNTD2Q9H8S5 307 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 POPDC2Q9HBU9 364 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 GCM1Q9NP62 436 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 TMEM9BQ9NQ34 198 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 RXFP3Q9NSD7 469 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 LMBRD1Q9NUN5 540 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 DLL3Q9NYJ7 618 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 THAP10Q9P2Z0 257 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 TMEFF2Q9UIK5 374 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 SLC27A6Q9Y2P4 619 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 RALGAPA1Q6GYQ0 2036 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 FANCMQ8IYD8 2048 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 GTPBP10A4D1E9 387 aaKnown RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 BECN2A8MW95 431 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 NPC1O15118 1278 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 IRAK2O43187 625 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PAPSS1O43252 624 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PRODHO43272 600 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 RNASEH1O60930 286 aaKnown RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 LATS1O95835 1130 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 DNTTP04053 509 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SLC2A3P11169 496 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 ZNF18P17022 549 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 TACR2P21452 398 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PRKCHP24723 683 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 EEF1GP26641 437 aaKnown RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 CD6P30203 668 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 HLA-FP30511 346 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SLC6A4P31645 630 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 CD70P32970 193 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 NNMTP40261 264 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SGSHP51688 502 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 ZNF33AQ06730 810 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 LMAN2Q12907 356 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 TAF5Q15542 800 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PLEKHG6Q3KR16 790 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 ACCSLQ4AC99 568 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PIK3R6Q5UE93 754 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 MSANTD2Q6P1R3 559 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 FAM183BPQ6ZVS7 135 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SPATC1Q76KD6 591 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PHLDB2Q86SQ0 1253 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 ERICH1Q86X53 443 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SYT12Q8IV01 421 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SCML4Q8N228 414 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 ZNF557Q8N988 423 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 TMEM35BQ8NCS4 154 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SHC3Q92529 594 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 TOE1Q96GM8 510 aaKnown RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 PIWIL1Q96J94 861 aaKnown RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 MRGPRX1Q96LB2 322 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 RPRD1AQ96P16 312 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SPAG5Q96R06 1193 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 CPXM1Q96SM3 734 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 GABRG3Q99928 467 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 GPR174Q9BXC1 333 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 FSCN3Q9NQT6 498 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 FAM207AQ9NSI2 230 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-219ENST00000589349 ANO10Q9NW15 660 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 SUN2Q9UH99 717 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 CYTH4Q9UIA0 394 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 NCKAP1Q9Y2A7 1128 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 VPS13AQ96RL7 3174 aa8.48□□□□□ -1.05
DNMT1-219ENST00000589349 OTOGLQ3ZCN5 2332 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 IGHV1OR15-9A0A0B4J2B8 117 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 ZC3H12DA2A288 527 aaKnown RBP8.47□□□□□ -1.05
DNMT1-219ENST00000589349 C22orf46C9J442 243 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 NPIPB6E9PJ23 425 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 M0QYT0 321 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 DLX3O60479 287 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 HSF2BPO75031 334 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 GFPT2O94808 682 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 ERBB2P04626 1255 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 OXTRP30559 389 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 CCR1P32246 355 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 CSKP41240 450 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 DPP6P42658 865 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 SULT1E1P49888 294 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 NOVA1P51513 510 aaKnown RBP8.47□□□□□ -1.05
DNMT1-219ENST00000589349 POLR2FP61218 127 aaKnown RBP8.47□□□□□ -1.05
DNMT1-219ENST00000589349 UBXN1Q04323 297 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 SLC9A5Q14940 896 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 STX1AQ16623 288 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 DUOXA1Q1HG43 343 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 MS4A13Q5J8X5 152 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 WDR45BQ5MNZ6 344 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 RABGAP1LQ5R372 815 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 FAM102AQ5T9C2 384 aaPredicted RBP8.47□□□□□ -1.05
DNMT1-219ENST00000589349 KLHDC7AQ5VTJ3 777 aa8.47□□□□□ -1.05
DNMT1-219ENST00000589349 MMS22LQ6ZRQ5 1243 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms