RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CEP44Q9C0F1 390 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 ZFP14Q9HCL3 533 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 THG1LQ9NWX6 298 aaKnown RBP11.5□□□□□ -0.57
SMAD4-205ENST00000588745 NSMCE4AQ9NXX6 385 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 SLC2A6Q9UGQ3 507 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 CHKBQ9Y259 395 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 PCDHGC4Q9Y5F7 938 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 MTCH2Q9Y6C9 303 aa11.5□□□□□ -0.57
SMAD4-205ENST00000588745 MYO9BQ13459 2157 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 A0A1W2PPC1 479 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 A0A1W2PPM1 405 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TMEM120BA0PK00 339 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 MROH6A6NGR9 719 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TRIM49D1C9J1S8 452 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TRIM24O15164 1050 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 LDB2O43679 373 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 FZD6O60353 706 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 ZNF821O75541 412 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 GSRP00390 522 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 CHN1P15882 459 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 POLR2EP19388 210 aaKnown RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 GP5P40197 560 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 MTHFRP42898 656 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 DGKGP49619 791 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 ECT2LQ008S8 904 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 FCHO2Q0JRZ9 810 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 GEN1Q17RS7 908 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 HSP90AA5PQ58FG0 334 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TEDDM1Q5T9Z0 273 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TANGO2Q6ICL3 276 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 C12orf40Q86WS4 652 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 CNTN4Q8IWV2 1026 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 C4orf33Q8N1A6 199 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 PCDH20Q8N6Y1 951 aaKnown RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 BLOC1S5Q8TDH9 187 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 PEX13Q92968 403 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 RMDN1Q96DB5 314 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 MTBPQ96DY7 904 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 MYO19Q96H55 970 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 ZFYVE19Q96K21 471 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 CAPS2Q9BXY5 557 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TNKS2Q9H2K2 1166 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 TTYH1Q9H313 450 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 EBF3Q9H4W6 596 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 ECT2Q9H8V3 914 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 SSU72Q9NP77 194 aaKnown RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 HPS4Q9NQG7 708 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 IARS2Q9NSE4 1012 aaKnown RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 PSD3Q9NYI0 1048 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.49□□□□□ -0.576e-6■□□□□ 8.3
SMAD4-205ENST00000588745 TXNDC16Q9P2K2 825 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 EVLQ9UI08 416 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 SMG5Q9UPR3 1016 aaKnown RBP11.49□□□□□ -0.57
SMAD4-205ENST00000588745 SLC27A6Q9Y2P4 619 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 PSAT1Q9Y617 370 aa11.49□□□□□ -0.57
SMAD4-205ENST00000588745 PRRC2BQ5JSZ5 2229 aaKnown RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 A6NNZ2 444 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 PRPF4O43172 522 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 SOCS5O75159 536 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 SIN3BO75182 1162 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 TULP3O75386 442 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 VAPBO95292 243 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 MT-ND3P03897 115 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ASLP04424 464 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 PRKCGP05129 697 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 PDHA1P08559 390 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 CISD3P0C7P0 127 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ARNTP27540 789 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 MDH1P40925 334 aaKnown RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GRIA4P48058 902 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ARCN1P48444 511 aaKnown RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 RGS19P49795 217 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 CSE1LP55060 971 aaKnown RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GNGT1P63211 74 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GUCY1A3Q02108 690 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ACVR1Q04771 509 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 BCL2L1Q07817 233 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 BMPR2Q13873 1038 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GRIN2CQ14957 1233 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 CNGA3Q16281 694 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GAB4Q2WGN9 574 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 TUBB8Q3ZCM7 444 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 DGKKQ5KSL6 1271 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GRTP1Q5TC63 336 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 TMEM215Q68D42 235 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 MFSD6LQ8IWD5 586 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 YAF2Q8IY57 180 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 CPA6Q8N4T0 437 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ST13P5Q8NFI4 369 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 OR13J1Q8NGT2 312 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 OR6K2Q8NGY2 324 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 MDM1Q8TC05 714 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms