RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 METTL12A8MUP2 240 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 TBC1D3LB9A6J9 549 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 NEMP1O14524 444 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 ZNF185O15231 689 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PLRG1O43660 514 aaKnown RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 FZD6O60353 706 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PGLSO95336 258 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 TBC1D3HP0C7X1 549 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 TIMP2P16035 220 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 GKP32189 559 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 COILP38432 576 aaPredicted RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 CD86P42081 329 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 GRIA4P48058 902 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 CCR5P51681 352 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 EPHB1P54762 984 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 ADPRHP54922 357 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 RPS21P63220 83 aaKnown RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 SKOR1P84550 965 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 DSC2Q02487 901 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 RPL6Q02878 288 aaKnown RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 CDK18Q07002 472 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 NIPAL4Q0D2K0 466 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 MPP3Q13368 585 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 SNX1Q13596 522 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 WDR45BQ5MNZ6 344 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 AGBL4Q5VU57 503 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 TBC1D3GQ6DHY5 549 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 TBC1D3CQ6IPX1 549 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 KIAA1161Q6NSJ0 714 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 SYDE1Q6ZW31 735 aaPredicted RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 USP45Q70EL2 814 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 B4GALNT4Q76KP1 1039 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PRPF39Q86UA1 669 aaKnown RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 TBC1D3Q8IZP1 549 aaPredicted RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PRSS33Q8NF86 280 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PDCD6IPQ8WUM4 868 aaKnown RBP9.14□□□□□ -0.95
CIRBP-218ENST00000588344 LRRN4Q8WUT4 740 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 ASB12Q8WXK4 309 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 ATG4AQ8WYN0 398 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 ARRDC3Q96B67 414 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 ERLEC1Q96DZ1 483 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 IFT43Q96FT9 208 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 SCRN2Q96FV2 425 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 FAM118BQ9BPY3 351 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 GBA3Q9H227 469 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 EPC1Q9H2F5 836 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PCDH9Q9HC56 1237 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 PCDHB9Q9Y5E1 797 aa9.14□□□□□ -0.95
CIRBP-218ENST00000588344 DOCK4Q8N1I0 1966 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 ZDBF2Q9HCK1 2354 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 LOC285095A0A1B0GVY8 99 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 UPK3BL1B0FP48 263 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 ANKRD66B4E2M5 251 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 UPK3BL2E5RIL1 263 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 AP3B1O00203 1094 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 AREL1O15033 823 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 RNGTTO60942 597 aaKnown RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 PHF2O75151 1096 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 PIGNO95427 931 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 NDST3O95803 873 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 GAS8O95995 478 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CPP00450 1065 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 IFNB1P01574 187 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 MMP2P08253 660 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CYP2A6P11509 494 aaPredicted RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 NFKB1P19838 968 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 ACSL1P33121 698 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CD68P34810 354 aaPredicted RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 HOXD12P35452 270 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 FDFT1P37268 417 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 NBL1P41271 181 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CKAP4Q07065 602 aaKnown RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 POM121L1PQ3SYA9 428 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 PLK5Q496M5 336 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 TMEM52BQ4KMG9 183 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 PIP5KL1Q5T9C9 394 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 KIAA0895LQ68EN5 471 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CCDC137Q6PK04 289 aaKnown RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 PARS2Q7L3T8 475 aaKnown RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 RABEPKQ7Z6M1 372 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 FAM124AQ86V42 546 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 TRIM69Q86WT6 500 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CACUL1Q86Y37 369 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 FAM174AQ8TBP5 190 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CCDC110Q8TBZ0 833 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CXorf40AQ8TE69 158 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 RLN3Q8WXF3 142 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 VOPP1Q96AW1 172 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CAPZA3Q96KX2 299 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 RBM15Q96T37 977 aaKnown RBP eCLIP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 MLPHQ9BV36 600 aaPredicted RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 GPR174Q9BXC1 333 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 C1QTNF7Q9BXJ2 289 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 FSD1LQ9BXM9 530 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 TDRD1Q9BXT4 1180 aaKnown RBP9.13□□□□□ -0.95
CIRBP-218ENST00000588344 CEP41Q9BYV8 373 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 SERGEFQ9UGK8 458 aa9.13□□□□□ -0.95
CIRBP-218ENST00000588344 PCYOX1Q9UHG3 505 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms