RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 TMEM160Q9NX00 188 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 NDE1Q9NXR1 346 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PRR13Q9NZ81 148 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 FAM153AQ9UHL3 310 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 GUCA1BQ9UMX6 200 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RPH3AQ9Y2J0 694 aaPredicted RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RRP7AQ9Y3A4 280 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CARMIL3Q8ND23 1372 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 WNK3Q9BYP7 1800 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 A0A087WWV3 80 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 C15orf38-AP3S2A0A0A6YYH1 394 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 A0A1W2PPL8 197 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ZSCAN5CA6NGD5 496 aaPredicted RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 DBX1A6NMT0 343 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TNPO2O14787 897 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PHF2O75151 1096 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CDK14O94921 469 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 HEXIM1O94992 359 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 LARGE1O95461 756 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ALBP02768 609 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CALB1P05937 261 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PGK2P07205 417 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 HSMCR30P0CW71 290 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RARGP13631 454 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 EEF2P13639 858 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 EPHB2P29323 1055 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PBX1P40424 430 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 GARSP41250 739 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 OR3A3P47888 321 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 POU3F4P49335 361 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 HK2P52789 917 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PNLIPRP1P54315 467 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RPS16P62249 146 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PLIN5Q00G26 463 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CD300CQ08708 224 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 MAPK7Q13164 816 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PLD1Q13393 1074 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 GALNT3Q14435 633 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 DMC1Q14565 340 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 NCF4Q15080 339 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 SGCAQ16586 387 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 GEN1Q17RS7 908 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 WSCD2Q2TBF2 565 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CYP27C1Q4G0S4 372 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 EXOSC6Q5RKV6 272 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 SLC22A25Q6T423 547 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ARPINQ7Z6K5 226 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 DNAAF5Q86Y56 855 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 SIAH1Q8IUQ4 282 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 KSR1Q8IVT5 923 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 BBS7Q8IWZ6 715 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PCSK9Q8NBP7 692 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TRIB2Q92519 343 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RAD51AP1Q96B01 352 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TMEM80Q96HE8 168 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TXNDC15Q96J42 360 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CNDP2Q96KP4 475 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 B3GALT6Q96L58 329 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TREX2Q9BQ50 279 aaPredicted RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 MYL10Q9BUA6 226 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ZSCAN5AQ9BUG6 496 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 BRIP1Q9BX63 1249 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 WNT8AQ9H1J5 351 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ISCUQ9H1K1 167 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 NARFLQ9H6Q4 476 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TRIM45Q9H8W5 580 aaPredicted RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RAVER2Q9HCJ3 691 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ACSS2Q9NR19 701 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 KRT84Q9NSB2 600 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ZNF624Q9P2J8 865 aaPredicted RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ADD3Q9UEY8 706 aaKnown RBP5.7□□□□□ -1.5
LINC01538-201ENST00000588074 TINAGQ9UJW2 476 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 BAG5Q9UL15 447 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 GINS2Q9Y248 185 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 DERAQ9Y315 318 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 HYOU1Q9Y4L1 999 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 PCDHA3Q9Y5H8 950 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 MAU2Q9Y6X3 613 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ARAP3Q8WWN8 1544 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 ABCC4O15439 1325 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 AOX1Q06278 1338 aa5.7□□□□□ -1.5
LINC01538-201ENST00000588074 RTL9Q8NET4 1388 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 MED23Q9ULK4 1368 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PI4KAP2A4QPH2 592 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 A6NL46 340 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ADARB2-AS1A8MUL3 147 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FAM25AB3EWG3 89 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FAM25CB3EWG5 89 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FAM25GB3EWG6 89 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 NOS1APO75052 506 aaPredicted RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PSIP1O75475 530 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 OR7A10O76100 309 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ZWINTO95229 277 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PGM3O95394 542 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SNAP29O95721 258 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 AGTP01019 485 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 C8BP07358 591 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CD48P09326 243 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms