RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 TAB2Q9NYJ8 693 aa5.68□□□□□ -1.5
TUBD1-208ENST00000588009 OGFRQ9NZT2 677 aa5.68□□□□□ -1.5
TUBD1-208ENST00000588009 MARCH4Q9P2E8 410 aaPredicted RBP5.68□□□□□ -1.5
TUBD1-208ENST00000588009 PTRH2Q9Y3E5 179 aaKnown RBP5.68□□□□□ -1.5
TUBD1-208ENST00000588009 LSM4Q9Y4Z0 139 aaKnown RBP5.68□□□□□ -1.5
TUBD1-208ENST00000588009 RIMBP3CA6NJZ7 1639 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 RIMBP3BA6NNM3 1639 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 RIMBP3Q9UFD9 1639 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 DDTLA6NHG4 134 aaPredicted RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 GLOD5A6NK44 160 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 RNMTO43148 476 aaKnown RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 HCRTR2O43614 444 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 NARSO43776 548 aaKnown RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 HS6ST1O60243 411 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 TBX10O75333 385 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 NKX2-2O95096 273 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 WNT1P04628 370 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 NHLRC4P0CG21 123 aaPredicted RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 IL7RP16871 459 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 TMEM11P17152 192 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 MCM7P33993 719 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 CAMPP49913 170 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 GALCP54803 685 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 PMPCAQ10713 525 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 GRIK3Q13003 919 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 IKQ13123 557 aaPredicted RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 PKP1Q13835 747 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 SPATS1Q496A3 300 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 AKNAD1Q5T1N1 836 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 HECTD3Q5T447 861 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 ADALQ6DHV7 355 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 LRRC8EQ6NSJ5 796 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 BCAS4Q8TDM0 211 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 WIPF2Q8TF74 440 aaPredicted RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 ELMOD3Q96FG2 381 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 TMEM68Q96MH6 324 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 OR2A14Q96R47 310 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 TOR3AQ9H497 397 aa5.67□□□□□ -1.5
TUBD1-208ENST00000588009 WDR6Q9NNW5 1121 aaKnown RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 CPSF2Q9P2I0 782 aaKnown RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 SEC63Q9UGP8 760 aaKnown RBP5.67□□□□□ -1.5
TUBD1-208ENST00000588009 TYW5A2RUC4 315 aaKnown RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 DPPA5A6NC42 116 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 KLRF2D3W0D1 207 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 C1QTNF3-AMACRE9PGA6 284 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 RNF8O76064 485 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 CD63P08962 238 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 PCNAP12004 261 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 ZNF182P17025 639 aaPredicted RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 CTPS1P17812 591 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 EEF1DP29692 281 aaKnown RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 SLC12A2P55011 1212 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 SHBQ15464 509 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 EARS2Q5JPH6 523 aaKnown RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 IGFL4Q6B9Z1 124 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 KBTBD6Q86V97 674 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 TMC8Q8IU68 726 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 ZCCHC9Q8N567 271 aaKnown RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 POGLUT1Q8NBL1 392 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 CMASQ8NFW8 434 aaPredicted RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 FIZ1Q96SL8 496 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 PIMREGQ9BSJ6 248 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 EFHD1Q9BUP0 239 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 ZNF341Q9BYN7 854 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 TKTL2Q9H0I9 626 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 SETD4Q9NVD3 440 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 ASB6Q9NWX5 421 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 PLEKHB1Q9UF11 243 aaPredicted RBP5.66□□□□□ -1.5
TUBD1-208ENST00000588009 ZNF112Q9UJU3 913 aa5.66□□□□□ -1.5
TUBD1-208ENST00000588009 ERCC6L2Q5T890 1561 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 TRBV5-7A0A0A0MS05 114 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 HSPB2A8KAH6 182 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 FOXO6A8MYZ6 492 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 TPPPO94811 219 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 VDRP11473 427 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 SRD5A1P18405 259 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 GPD1P21695 349 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 CIITAP33076 1130 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 SHMT1P34896 483 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 PIK3CAP42336 1068 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 HSF1Q00613 529 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 HSPB2Q16082 182 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 ERMARDQ5T6L9 678 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 PRAMEF17Q5VTA0 474 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 PMS2CLQ68D20 193 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 ZNF813Q6ZN06 617 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 Q6ZPA2 131 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 CFAP77Q6ZQR2 320 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 GALNTL5Q7Z4T8 443 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 SERPINA11Q86U17 422 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 GALNT13Q8IUC8 556 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 ADGRF4Q8IZF3 695 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 MAP4K1Q92918 833 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 PGAP3Q96FM1 320 aaPredicted RBP5.65□□□□□ -1.5
TUBD1-208ENST00000588009 ZC3HAV1LQ96H79 300 aaKnown RBP5.65□□□□□ -1.5
TUBD1-208ENST00000588009 SPATA17Q96L03 361 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 ADPGKQ9BRR6 497 aa5.65□□□□□ -1.5
TUBD1-208ENST00000588009 C1QTNF5Q9BXJ0 243 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms