RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 DOLKQ9UPQ8 538 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 NEU3Q9UQ49 428 aa9.75□□□□□ -0.85
LINC01539-201ENST00000587904 KCNU1A8MYU2 1149 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 FAM25EA8MYX2 175 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 AP3B1O00203 1094 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 C2CD2LO14523 706 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 GYG2O15488 501 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 PAGE1O75459 146 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 AMHP03971 560 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 INHBAP08476 426 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 HAPLN1P10915 354 aaPredicted RBP9.74□□□□□ -0.85
LINC01539-201ENST00000587904 PTPN3P26045 913 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 KRT6CP48668 564 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 TLE2Q04725 743 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 NAB1Q13506 487 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 THOC5Q13769 683 aaKnown RBP9.74□□□□□ -0.85
LINC01539-201ENST00000587904 IKBKEQ14164 716 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 DDR2Q16832 855 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 TCTN1Q2MV58 587 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 IGDCC3Q8IVU1 814 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 AHI1Q8N157 1196 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 CENPSQ8N2Z9 138 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 CPSF7Q8N684 471 aaKnown RBP9.74□□□□□ -0.85
LINC01539-201ENST00000587904 ATP6V0D2Q8N8Y2 350 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 GSDMBQ8TAX9 411 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 DCAKDQ8WVC6 231 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 C10orf82Q8WW14 230 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 SDCCAG3Q96C92 435 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 SLC39A13Q96H72 371 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 SCLYQ96I15 445 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 SIGLEC10Q96LC7 697 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 TSGA13Q96PP4 275 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 NMUR1Q9HB89 426 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 KCNK9Q9NPC2 374 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 TRNAU1APQ9NX07 287 aaKnown RBP9.74□□□□□ -0.85
LINC01539-201ENST00000587904 RSL24D1Q9UHA3 163 aaKnown RBP9.74□□□□□ -0.85
LINC01539-201ENST00000587904 GNPTGQ9UJJ9 305 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 TBX21Q9UL17 535 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 BACE2Q9Y5Z0 518 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 CEPT1Q9Y6K0 416 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 SCN5AQ14524 2016 aa9.74□□□□□ -0.85
LINC01539-201ENST00000587904 C15orf38-AP3S2A0A0A6YYH1 394 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 A0A1W2PQ67 120 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 WASH4PA8MWX3 477 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 HAT1O14929 419 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 PEX1O43933 1283 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 FAM155BO75949 473 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 FKBP9O95302 570 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 PGM3O95394 542 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 KRT75O95678 551 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 EFEMP2O95967 443 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 CHEK2O96017 543 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 CDH2P19022 906 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 PSMB4P28070 264 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ALDH7A1P49419 539 aaKnown RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 KPNA1P52294 538 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 CCL23P55773 120 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 IRX4P78413 519 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 KCNJ8Q15842 424 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 TAF1BQ53T94 588 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 RTP2Q5QGT7 225 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 STEAP4Q687X5 459 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 SLC8B1Q6J4K2 584 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ARPINQ7Z6K5 226 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 SLC26A11Q86WA9 606 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ELMOD1Q8N336 334 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 CCDC33Q8N5R6 958 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 METTL25Q8N6Q8 603 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 LSMEM1Q8N8F7 131 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ATAD1Q8NBU5 361 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 MGARPQ8TDB4 240 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 LRRN4Q8WUT4 740 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 FBXO32Q969P5 355 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 PTCD3Q96EY7 689 aaKnown RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 CFAP36Q96G28 342 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 FCRL2Q96LA5 508 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 PGLYRP2Q96PD5 576 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 GMIPQ9P107 970 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 MTRRQ9UBK8 725 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 DNAJC16Q9Y2G8 782 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 LTBP2Q14767 1821 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF638Q14966 1978 aaKnown RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 TET1Q8NFU7 2136 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 SDR42E2A6NKP2 422 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 RGS13O14921 159 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 PSMD3O43242 534 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 MSI1O43347 362 aaKnown RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 DENRO43583 198 aaKnown RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 AVILO75366 819 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 AP2A1O95782 977 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 KRT6AP02538 564 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 KRT6BP04259 564 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ENO2P09104 434 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 M6PRP20645 277 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 CCNCP24863 283 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 DNAJB2P25686 324 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ENTPD1P49961 510 aa9.73□□□□□ -0.85
LINC01539-201ENST00000587904 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-201ENST00000587904 ATN1P54259 1190 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms