RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 SYNDIG1Q9H7V2 258 aa13.9□□□□□ -0.18
RDH13-209ENST00000587721 CAAP1Q9H8G2 361 aa13.9□□□□□ -0.18
RDH13-209ENST00000587721 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.18
RDH13-209ENST00000587721 ENTPD2Q9Y5L3 495 aa13.9□□□□□ -0.18
RDH13-209ENST00000587721 DOCK4Q8N1I0 1966 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 CCDC187A0A096LP49 1063 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 RASA4BC9J798 803 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 RASA4O43374 803 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 CREB3O43889 395 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 C1QL1O75973 258 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 RASGRP1O95267 797 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 TIMP2P16035 220 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 HTR7P34969 479 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 ZNF143P52747 638 aaPredicted RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 HK3P52790 923 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 EIF3IQ13347 325 aaKnown RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 KRT31Q15323 416 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 TMEM52BQ4KMG9 183 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 LRRC73Q5JTD7 316 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 DNAJC24Q6P3W2 148 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 BRAT1Q6PJG6 821 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 GKN2Q86XP6 184 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 HID1Q8IV36 788 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 SLC35F3Q8IY50 421 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 ZNF843Q8N446 348 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 PAF1Q8N7H5 531 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 ARL10Q8N8L6 244 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 NEK11Q8NG66 645 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 OR6C4Q8NGE1 309 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 WRAP53Q9BUR4 548 aaKnown RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 TCEAL2Q9H3H9 227 aaPredicted RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 CPNE5Q9HCH3 593 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 MBNL1Q9NR56 388 aaKnown RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 GULP1Q9UBP9 304 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 NEU3Q9UQ49 428 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 TDRD6O60522 2096 aaKnown RBP13.89□□□□□ -0.19
RDH13-209ENST00000587721 SHROOM3Q8TF72 1996 aa13.89□□□□□ -0.19
RDH13-209ENST00000587721 WASH4PA8MWX3 477 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 TNFSF15O95150 251 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 GJB6O95452 261 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 KLK7P49862 253 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
RDH13-209ENST00000587721 SERINC3Q13530 473 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 IRF4Q15306 451 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 UGP2Q16851 508 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 CLEC16AQ2KHT3 1053 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 PERM1Q5SV97 790 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 ENPP7Q6UWV6 458 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 RD3Q7Z3Z2 195 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 UMODL1-AS1Q8N2C9 162 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 HMCESQ96FZ2 354 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 CNPY3Q9BT09 278 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 MAGEB5Q9BZ81 275 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 EDEM3Q9BZQ6 932 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
RDH13-209ENST00000587721 NBEAQ8NFP9 2946 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 PTPRQQ9UMZ3 2332 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 EIF3CLB5ME19 914 aaKnown RBP13.87□□□□□ -0.19
RDH13-209ENST00000587721 CCP110O43303 1012 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 ITGA2BP08514 1039 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 TPI1P60174 286 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 PTP4A2Q12974 167 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 NFATC4Q14934 902 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 CDKAL1Q5VV42 579 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 CCDC81Q6ZN84 652 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 PYROXD2Q8N2H3 581 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
RDH13-209ENST00000587721 EXOC2Q96KP1 924 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 MCEEQ96PE7 176 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 GFM1Q96RP9 751 aaKnown RBP13.87□□□□□ -0.19
RDH13-209ENST00000587721 TUBGCP5Q96RT8 1024 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 EIF3CQ99613 913 aaKnown RBP13.87□□□□□ -0.19
RDH13-209ENST00000587721 CLPBQ9H078 707 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 NOL6Q9H6R4 1146 aaKnown RBP13.87□□□□□ -0.19
RDH13-209ENST00000587721 KLQ9UEF7 1012 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 FZD10Q9ULW2 581 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 GPR34Q9UPC5 381 aa13.87□□□□□ -0.19
RDH13-209ENST00000587721 TSPAN11A1L157 253 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 CFAP69A5D8W1 941 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 ARHGAP42A6NI28 874 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 CDRT15L2A8MXV6 281 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 CACNB4O00305 520 aaPredicted RBP13.86□□□□□ -0.19
RDH13-209ENST00000587721 PIGNO95427 931 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 TNFP01375 233 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 C6P13671 934 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 PLA2G2AP14555 144 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 ITIH2P19823 946 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
RDH13-209ENST00000587721 KELP23276 732 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 SERPINA4P29622 427 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 NDST2P52849 883 aa13.86□□□□□ -0.19
RDH13-209ENST00000587721 SRP54P61011 504 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms