RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 CCNG2Q16589 344 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 ZC2HC1CQ53FD0 456 aaPredicted RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 ATAT1Q5SQI0 421 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 RARS2Q5T160 578 aaKnown RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 ANKS6Q68DC2 871 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 ZCCHC8Q6NZY4 707 aaKnown RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 ARMCX5Q6P1M9 558 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 DCLRE1AQ6PJP8 1040 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 TMEM184AQ6ZMB5 413 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 CCDC149Q6ZUS6 474 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 USP49Q70CQ1 688 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 PDZD4Q76G19 769 aaPredicted RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 FGD2Q7Z6J4 655 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 ADHFE1Q8IWW8 467 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 CD302Q8IX05 232 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 RHOT2Q8IXI1 618 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 TDRD5Q8NAT2 981 aaKnown RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 APPL2Q8NEU8 664 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 BEST2Q8NFU1 509 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 STAMQ92783 540 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 FUBP3Q96I24 572 aaKnown RBP eCLIP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 BOD1Q96IK1 185 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 MSLNLQ96KJ4 702 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 RPGRIP1Q96KN7 1286 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 CLUHP3Q96NS8 147 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 KLHL5Q96PQ7 755 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 PPP1R10Q96QC0 940 aaKnown RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 NELL2Q99435 816 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 AIFM2Q9BRQ8 373 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 CENPOQ9BU64 300 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 C1QTNF1Q9BXJ1 281 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 FAM204AQ9H8W3 233 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 PLEKHA5Q9HAU0 1116 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 OLFML3Q9NRN5 406 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 MIOSQ9NXC5 875 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 TBC1D7Q9P0N9 293 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 SAMD15Q9P1V8 674 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 AGO2Q9UKV8 859 aaKnown RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 UBQLN1Q9UMX0 589 aaKnown RBP4.94□□□□□ -1.62
ZNF540-204ENST00000586792 MRFAP1Q9Y605 127 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 IKBKGQ9Y6K9 419 aa4.94□□□□□ -1.62
ZNF540-204ENST00000586792 PRRC2BQ5JSZ5 2229 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 SYNDIG1LA6NDD5 238 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 DRGXA6NNA5 263 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 H7C4K7 107 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 M0R3H8 397 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PODXLO00592 558 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 SYN3O14994 580 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 KIAA0391O15091 583 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TEX28O15482 410 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 OPA1O60313 960 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TIPRLO75663 272 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 GFPT2O94808 682 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 IL18RAPO95256 599 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 IL33O95760 270 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PIGRP01833 764 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 CNPP09543 421 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ODC1P11926 461 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ALADP13716 330 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 KCNE1P15382 129 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 EPCAMP16422 314 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 RHCEP18577 417 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 CYP3A5P20815 502 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ELF1P32519 619 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 HOXD12P35452 270 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 CLCN4P51793 760 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 MPP1Q00013 466 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TSPY1Q01534 308 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 RHDQ02161 417 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PKP1Q13835 747 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TMEM132DQ14C87 1099 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TERF2Q15554 542 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 UPP1Q16831 310 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PPM1LQ5SGD2 360 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 MFSD4BQ5TF39 518 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 RESP18Q5W5W9 173 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TLDC1Q6P9B6 456 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ZNF449Q6P9G9 518 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 SHC4Q6S5L8 630 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 DSTYKQ6XUX3 929 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ZNF720Q7Z2F6 126 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 GALNT5Q7Z7M9 940 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 USP37Q86T82 979 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TBC1D1Q86TI0 1168 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PALB2Q86YC2 1186 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 EGFL6Q8IUX8 553 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 SLC41A1Q8IVJ1 513 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 GPR65Q8IYL9 337 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ELMOD1Q8N336 334 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 LSMEM1Q8N8F7 131 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 OR56A1Q8NGH5 318 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 HDAC7Q8WUI4 952 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ZFPM2Q8WW38 1151 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 HSPBAP1Q96EW2 488 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ZBTB45Q96K62 511 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 B3GALT6Q96L58 329 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 SGCZQ96LD1 299 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ZMAT2Q96NC0 199 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ELF4Q99607 663 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms