RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 NDUFAF2Q8N183 169 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 IPMKQ8NFU5 416 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 OXNAD1Q96HP4 312 aaPredicted RBP13.74□□□□□ -0.21
VMP1-203ENST00000586245 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 CARD6Q9BX69 1037 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 FSD1LQ9BXM9 530 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 TDRD1Q9BXT4 1180 aaKnown RBP13.74□□□□□ -0.21
VMP1-203ENST00000586245 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 HDAC8Q9BY41 377 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 ETNK1Q9HBU6 452 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 ASIC3Q9UHC3 531 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 CHKBQ9Y259 395 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
VMP1-203ENST00000586245 PCDHB9Q9Y5E1 797 aa13.74□□□□□ -0.21
VMP1-203ENST00000586245 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 FAM187AA6NFU0 413 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 TTI1O43156 1089 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 PGLSO95336 258 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 DRD3P35462 400 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 P2RY2P41231 377 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 WNT3AP56704 352 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 CDK18Q07002 472 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 CNTN1Q12860 1018 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 SEMA5AQ13591 1074 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 PTK6Q13882 451 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 KDELC1Q6UW63 502 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.73□□□□□ -0.21
VMP1-203ENST00000586245 KDELC2Q7Z4H8 507 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 TTC7BQ86TV6 843 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 MAML2Q8IZL2 1156 aaPredicted RBP13.73□□□□□ -0.21
VMP1-203ENST00000586245 AADATQ8N5Z0 425 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 LPCAT1Q8NF37 534 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 VOPP1Q96AW1 172 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 FEM1CQ96JP0 617 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 MLPHQ9BV36 600 aaPredicted RBP13.73□□□□□ -0.21
VMP1-203ENST00000586245 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 USP36Q9P275 1121 aaKnown RBP13.73□□□□□ -0.21
VMP1-203ENST00000586245 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
VMP1-203ENST00000586245 ZDBF2Q9HCK1 2354 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 ERI2A8K979 691 aaKnown RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 PLK4O00444 970 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 SLC7A4O43246 635 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 FZD6O60353 706 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 NDST3O95803 873 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 ADRB3P13945 408 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 TIMP2P16035 220 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 OXTRP30559 389 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 ADCY8P40145 1251 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 FNTBP49356 437 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 TPMTP51580 245 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 SUOXP51687 545 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 DMWDQ09019 674 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 IHHQ14623 411 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 UGP2Q16851 508 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 ERAP2Q6P179 960 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 FAM124AQ86V42 546 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 WDR5BQ86VZ2 330 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 RAB7BQ96AH8 199 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 GORASP1Q9BQQ3 440 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 FICDQ9BVA6 458 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 FAM126AQ9BYI3 521 aaPredicted RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 BTBD1Q9H0C5 482 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 L2HGDHQ9H9P8 463 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 SERGEFQ9UGK8 458 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
VMP1-203ENST00000586245 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
VMP1-203ENST00000586245 NEMP1O14524 444 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 RAD51CO43502 376 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 AP2A1O95782 977 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 EPOP01588 193 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 IGLV3-19P01714 112 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 APRTP07741 180 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 PDHA1P08559 390 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 TDGF1P13385 188 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 HLA-DPA1P20036 260 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 GRIA4P48058 902 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 TERF1P54274 439 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 ELP6Q0PNE2 266 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 GALNT3Q14435 633 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms