RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 FSTL5Q8N475 847 aaPredicted RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 CXorf40AQ8TE69 158 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 NTAN1Q96AB6 310 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 LIN37Q96GY3 246 aaPredicted RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 GDAP1L1Q96MZ0 367 aa14.63□□□□□ -0.07
SDF2-202ENST00000585428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.63□□□□□ -0.07
SDF2-202ENST00000585428 SAMSN1Q9NSI8 373 aaKnown RBP14.63□□□□□ -0.07
SDF2-202ENST00000585428 FLNBO75369 2602 aaKnown RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 ZNF462Q96JM2 2506 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 DOCK4Q8N1I0 1966 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 NOBOXO60393 691 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 GFPT2O94808 682 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 GJB6O95452 261 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 KRT3P12035 628 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 GSCP56915 257 aaPredicted RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 YBEYP58557 167 aaPredicted RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 SERINC3Q13530 473 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 SPIDRQ14159 915 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 LRRC14Q15048 493 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 AGERQ15109 404 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 ELOCQ15369 112 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 CYTH1Q15438 398 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 DPCR1Q3MIW9 517 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 TCP11X2Q5H9J9 407 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 KIAA1614Q5VZ46 1190 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 FOXR1Q6PIV2 292 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 SLFN11Q7Z7L1 901 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 PYROXD2Q8N2H3 581 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 ARL10Q8N8L6 244 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 NETO2Q8NC67 525 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 FAM172AQ8WUF8 416 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 SCG3Q8WXD2 468 aaKnown RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 TSACCQ96A04 125 aaPredicted RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 CCNL2Q96S94 520 aaPredicted RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 PCDHB18PQ96TA0 734 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 WRAP53Q9BUR4 548 aaKnown RBP14.62□□□□□ -0.07
SDF2-202ENST00000585428 EDEM3Q9BZQ6 932 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 GANQ9H2C0 597 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 GULP1Q9UBP9 304 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 ACSL6Q9UKU0 697 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 PCDHGA7Q9Y5G6 932 aa14.62□□□□□ -0.07
SDF2-202ENST00000585428 A0A1W2PQM1 296 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 WASH4PA8MWX3 477 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 TMX2-CTNND1H3BSU7 103 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 PLD2O14939 933 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 INSIG1O15503 277 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 ALPIP09923 528 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 SLC5A2P31639 672 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 CCL7P80098 99 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 INPP5AQ14642 412 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 IRF4Q15306 451 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 UGP2Q16851 508 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 ALG11Q2TAA5 492 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 WDR59Q6PJI9 974 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 OGFOD3Q6PK18 319 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 NYAP1Q6ZVC0 841 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 B3GNT8Q7Z7M8 397 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 HID1Q8IV36 788 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 RTL3Q8N8U3 475 aaKnown RBP14.61□□□□□ -0.07
SDF2-202ENST00000585428 APOOQ9BUR5 198 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 SUV39H2Q9H5I1 410 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 LHX3Q9UBR4 397 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 COQ6Q9Y2Z9 468 aa14.61□□□□□ -0.07
SDF2-202ENST00000585428 TSPAN11A1L157 253 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 SIGLEC16A6NMB1 481 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 PES1O00541 588 aaKnown RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 IGSF6O95976 241 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 CTSEP14091 401 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 EEF1GP26641 437 aaKnown RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 EPHB2P29323 1055 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 UGT1A5P35504 534 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 SOX5P35711 763 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 JAM2P57087 298 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 SRP54P61011 504 aaKnown RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 RHOAP61586 193 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 ELP6Q0PNE2 266 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 EIF3IQ13347 325 aaKnown RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 CT47A1Q5JQC4 288 aaPredicted RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 ENPP7Q6UWV6 458 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 RAB11FIP2Q7L804 512 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 UMODL1-AS1Q8N2C9 162 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 FBXO39Q8N4B4 442 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 EXD3Q8N9H8 876 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 GPR156Q8NFN8 814 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 OR6C4Q8NGE1 309 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 PCDH19Q8TAB3 1148 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 CCDC74AQ96AQ1 378 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 HMCESQ96FZ2 354 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 GFM1Q96RP9 751 aaKnown RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 C11orf70Q9BRQ4 267 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 APPL1Q9UKG1 709 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 ATXN7L1Q9ULK2 861 aaPredicted RBP14.6□□□□□ -0.07
SDF2-202ENST00000585428 GPR34Q9UPC5 381 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 DOLKQ9UPQ8 538 aa14.6□□□□□ -0.07
SDF2-202ENST00000585428 TCRBV5S1A1TA0A578 114 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 RASA4BC9J798 803 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 NVLO15381 856 aaKnown RBP14.59□□□□□ -0.07
SDF2-202ENST00000585428 RASA4O43374 803 aa14.59□□□□□ -0.07
SDF2-202ENST00000585428 RASGRP1O95267 797 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms