RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 MUSKO15146 869 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 PRAMEF11O60813 436 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 USP12O75317 370 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 PRKCGP05129 697 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 ANXA6P08133 673 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 HTR7P34969 479 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 EIF4A3P38919 411 aaKnown RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 PAPOLAP51003 745 aaKnown RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 NDST2P52849 883 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 GABREP78334 506 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 TBC1D25Q3MII6 688 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 TMEM52BQ4KMG9 183 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 FILIP1LQ4L180 1135 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 PPP6R3Q5H9R7 873 aaPredicted RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 MACC1Q6ZN28 852 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 TP53I13Q8NBR0 393 aaPredicted RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 VCPIP1Q96JH7 1222 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 PEBP4Q96S96 227 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 KCTD15Q96SI1 283 aaPredicted RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 SYT11Q9BT88 431 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 SNRNP25Q9BV90 132 aaKnown RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 LRRC61Q9BV99 259 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 SLC39A8Q9C0K1 460 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 SUV39H2Q9H5I1 410 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 SYNDIG1Q9H7V2 258 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 PDFQ9HBH1 243 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 RTN4Q9NQC3 1192 aaKnown RBP20.63■□□□□ 0.89
TOP3A-219ENST00000584887 NCKIPSDQ9NZQ3 722 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 TMEM63CQ9P1W3 806 aa20.63■□□□□ 0.89
TOP3A-219ENST00000584887 DFFAO00273 331 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 PRPSAP2O60256 369 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 GCATO75600 419 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 RNF8O76064 485 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 SUOXP51687 545 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 YPEL5P62699 121 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 PPARDQ03181 441 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 GRM3Q14832 879 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 LRRC14Q15048 493 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 PLEKHA7Q6IQ23 1121 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 ERAP2Q6P179 960 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 CAMK1DQ8IU85 385 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 HID1Q8IV36 788 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 GLMNQ92990 594 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 ZNF653Q96CK0 615 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 NAF1Q96HR8 494 aaKnown RBP20.62■□□□□ 0.89
TOP3A-219ENST00000584887 TRIM7Q9C029 511 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 HAUS4Q9H6D7 363 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 SP110Q9HB58 689 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 SALL4Q9UJQ4 1053 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 PNMA8BQ9ULN7 279 aaPredicted RBP20.62■□□□□ 0.89
TOP3A-219ENST00000584887 DOLKQ9UPQ8 538 aa20.62■□□□□ 0.89
TOP3A-219ENST00000584887 RP1P56715 2156 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 SMTNL1A8MU46 457 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 TPP1O14773 563 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 LZTS3O60299 673 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-219ENST00000584887 PALMO75781 387 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 FTLP02792 175 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-219ENST00000584887 C6P13671 934 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 TGM2P21980 687 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 RPIAP49247 311 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 ACAP1Q15027 740 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 UGP2Q16851 508 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 WSCD2Q2TBF2 565 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 ERMARDQ5T6L9 678 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 RFX8Q6ZV50 586 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 ZNF571Q7Z3V5 609 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-219ENST00000584887 RD3Q7Z3Z2 195 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 ARFGAP1Q8N6T3 406 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 BBC3Q96PG8 261 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-219ENST00000584887 LGMNQ99538 433 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 CINPQ9BW66 212 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-219ENST00000584887 MYO1AQ9UBC5 1043 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 CNOT8Q9UFF9 292 aaKnown RBP20.61■□□□□ 0.89
TOP3A-219ENST00000584887 RAI2Q9Y5P3 530 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 CELSR3Q9NYQ7 3312 aa20.61■□□□□ 0.89
TOP3A-219ENST00000584887 TSPAN11A1L157 253 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 EIF3CLB5ME19 914 aaKnown RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 LMO7DNF2Z398 122 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 BUB1BO60566 1050 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 PCCBP05166 539 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 CELA2BP08218 269 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 TSHRP16473 764 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 ERCC2P18074 760 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 MIPP30301 263 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 RGRP47804 291 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 LIG3P49916 1009 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 KLHL30Q0D2K2 578 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 E4F1Q66K89 784 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 BRAT1Q6PJG6 821 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 SRLQ86TD4 932 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 SLC35F3Q8IY50 421 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 TSEN2Q8NCE0 465 aaKnown RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 TSACCQ96A04 125 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 ZNF641Q96N77 438 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 TUBGCP5Q96RT8 1024 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 EIF3CQ99613 913 aaKnown RBP20.6■□□□□ 0.89
TOP3A-219ENST00000584887 ATP13A3Q9H7F0 1226 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 SIRPGQ9P1W8 387 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 GULP1Q9UBP9 304 aa20.6■□□□□ 0.89
TOP3A-219ENST00000584887 ATP8A1Q9Y2Q0 1164 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms