RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CALN1Q9BXU9 219 aa13.29□□□□□ -0.28
ERBB2-220ENST00000584684 SUV39H2Q9H5I1 410 aa13.29□□□□□ -0.28
ERBB2-220ENST00000584684 ETNK2Q9NVF9 386 aa13.29□□□□□ -0.28
ERBB2-220ENST00000584684 CTTNBP2NLQ9P2B4 639 aa13.29□□□□□ -0.28
ERBB2-220ENST00000584684 SEPT3Q9UH03 358 aa13.29□□□□□ -0.28
ERBB2-220ENST00000584684 C1QTNF9BB2RNN3 333 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 ENC1O14682 589 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 MAFKO60675 156 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 TM7SF2O76062 418 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 PAK4O96013 591 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 C1QTNF9P0C862 333 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 NME1P15531 152 aaKnown RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 AMPD1P23109 780 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 IL4RP24394 825 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 CDH6P55285 790 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 BNIP3Q12983 259 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 FZD2Q14332 565 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 LBRQ14739 615 aaKnown RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 AGERQ15109 404 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 SMAD1Q15797 465 aaKnown RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 TSR1Q2NL82 804 aaKnown RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 RALGPS1Q5JS13 557 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 TMPRSS7Q7RTY8 843 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 SRLQ86TD4 932 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 PARGQ86W56 976 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 NETO2Q8NC67 525 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 RNF214Q8ND24 703 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 CXorf40AQ8TE69 158 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 CNDP2Q96KP4 475 aaKnown RBP13.28□□□□□ -0.28
ERBB2-220ENST00000584684 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 ATP8A1Q9Y2Q0 1164 aa13.28□□□□□ -0.28
ERBB2-220ENST00000584684 PLXNB3Q9ULL4 1909 aa13.27□□□□□ -0.28
ERBB2-220ENST00000584684 CFAP69A5D8W1 941 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 MUSKO15146 869 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 AKR1B10O60218 316 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 BUB1BO60566 1050 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 SOCS5O75159 536 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 PIAS2O75928 621 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 MTA2O94776 668 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 LDOC1O95751 146 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 KRT7P08729 469 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 CR2P20023 1033 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 XPAP23025 273 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 DGKAP23743 735 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 IGFALSP35858 605 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 ACADVLP49748 655 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 HNRNPKP61978 463 aaKnown RBP eCLIP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 YPEL5P62699 121 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 SLC10A7Q0GE19 358 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 ZNF211Q13398 564 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-220ENST00000584684 ILKQ13418 452 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 DPYSL3Q14195 570 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 KRT81Q14533 505 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 PDK2Q15119 407 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 PROX2Q3B8N5 592 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 LRRC73Q5JTD7 316 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 ERAP2Q6P179 960 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 ZSWIM9Q86XI8 627 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 TP53INP2Q8IXH6 220 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 GALNT15Q8N3T1 639 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 SLC25A45Q8N413 288 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 ATPAF2Q8N5M1 289 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 EID2Q8N6I1 236 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 OR4C6Q8NH72 309 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 FATE1Q969F0 183 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 FAF2Q96CS3 445 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 TBATAQ96M53 351 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 MGME1Q9BQP7 344 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 PCDH12Q9NPG4 1184 aa13.27□□□□□ -0.29
ERBB2-220ENST00000584684 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 A0A1W2PQ67 120 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 ZNF487B1APH4 448 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 MMP20O60882 483 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 SDC3O75056 442 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 RFPL3O75679 317 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 APC2O95996 2303 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 CSF2P04141 144 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 C6P13671 934 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 DSPP15924 2871 aaKnown RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 BCL2L1Q07817 233 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 GOLGA4Q13439 2230 aaKnown RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 ZNF235Q14590 738 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 PAFAH1B3Q15102 231 aaKnown RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 TCEAL1Q15170 157 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 VSIG1Q86XK7 387 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 RHOT2Q8IXI1 618 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 TP53I13Q8NBR0 393 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 SHROOM3Q8TF72 1996 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 CCDC42Q96M95 316 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 NUDCD1Q96RS6 583 aa13.26□□□□□ -0.29
ERBB2-220ENST00000584684 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 NHEJ1Q9H9Q4 299 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-220ENST00000584684 NLGN3Q9NZ94 848 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms