RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 WDR5P61964 334 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 ARHGAP8P85298 464 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PRKD1Q15139 912 aaPredicted RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 TEAD2Q15562 447 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 NECAB2Q7Z6G3 386 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SPPL2BQ8TCT7 592 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 NUDT8Q8WV74 236 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 KLK6Q92876 244 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 MRGPRX2Q96LB1 330 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 CDK15Q96Q40 435 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 EFR3BQ9Y2G0 817 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TIMM22Q9Y584 194 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 ZNF638Q14966 1978 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 FCHO1O14526 889 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 NDC80O14777 642 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TYROBPO43914 113 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 CA3P07451 260 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SLC1A6P48664 564 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TUFMP49411 452 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 SNCBQ16143 134 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 RAB41Q5JT25 222 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 CROCCP2Q86T23 111 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TMEM25Q86YD3 366 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 KREMEN2Q8NCW0 462 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SEMA4BQ9NPR2 832 aaPredicted RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 SPO11Q9Y5K1 396 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SCN4AP35499 1836 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 H7C4K7 107 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 INPP4BO15327 924 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 NDUFS3O75489 264 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 ANXA9O76027 345 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 JUNP05412 331 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 ENO3P13929 434 aaPredicted RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 STMN1P16949 149 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 GABRB3P28472 473 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 GALNT2Q10471 571 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 RASA2Q15283 850 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PM20D1Q6GTS8 502 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 CEP128Q6ZU80 1094 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 HHIPL1Q96JK4 782 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 C11orf49Q9H6J7 331 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 NMRAL1Q9HBL8 299 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PLLPQ9Y342 182 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SCN5AQ14524 2016 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 UPK3BL1B0FP48 263 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 UPK3BL2E5RIL1 263 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 MATN3O15232 486 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 EDF1O60869 148 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 NIPSNAP2O75323 286 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 FGBP02675 491 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TYMPP19971 482 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PBX2P40425 430 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PKNOX1P55347 436 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PDAP1Q13442 181 aaKnown RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 CUL3Q13618 768 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 PDK4Q16654 411 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SDCCAG8Q86SQ7 713 aaPredicted RBP10.36□□□□□ -0.75
RFFL-212ENST00000584655 GANCQ8TET4 914 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 GORASP1Q9BQQ3 440 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 CSNK1G1Q9HCP0 422 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 SCML2Q9UQR0 700 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 TLR6Q9Y2C9 796 aa10.36□□□□□ -0.75
RFFL-212ENST00000584655 CCDC162PA2VCL2 907 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 SUPT3HB4E1H0 165 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 SUPT3HO75486 399 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 SRP72O76094 671 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 CDK18Q07002 472 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 PAFAH1B3Q15102 231 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 PTPRNQ16849 979 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 C18orf21Q32NC0 220 aaPredicted RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 PPM1LQ5SGD2 360 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 Q6ZVU0 165 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 GAREM2Q75VX8 874 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 EIF1ADQ8N9N8 165 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 UROC1Q96N76 676 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 WBP1LQ9NX94 342 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 ZMYM5Q9UJ78 669 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 AAR2Q9Y312 384 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 PRKAB1Q9Y478 270 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 C1orf232A0A0U1RR37 186 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 KPNA3O00505 521 aaPredicted RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 ZWINTO95229 277 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 GOT2P00505 430 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 GEMP55040 296 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 PITRM1Q5JRX3 1037 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 TRIM74Q86UV6 250 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 FSTL5Q8N475 847 aaPredicted RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 GCNAQ96QF7 691 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 MRPL9Q9BYD2 267 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 ACE2Q9BYF1 805 aaPredicted RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 ACOT9Q9Y305 439 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 RAI2Q9Y5P3 530 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 OR6C75A6NL08 312 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 ZBTB14O43829 449 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 TFEBP19484 476 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms