RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
SKA2-208ENST00000583927 CHP1Q99653 195 aa10□□□□□ -0.81
SKA2-208ENST00000583927 CINPQ9BW66 212 aaPredicted RBP10□□□□□ -0.81
SKA2-208ENST00000583927 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
SKA2-208ENST00000583927 C1QTNF7Q9BXJ2 289 aa10□□□□□ -0.81
SKA2-208ENST00000583927 PACSIN1Q9BY11 444 aa10□□□□□ -0.81
SKA2-208ENST00000583927 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
SKA2-208ENST00000583927 ETNK2Q9NVF9 386 aa10□□□□□ -0.81
SKA2-208ENST00000583927 CTTNBP2NLQ9P2B4 639 aa10□□□□□ -0.81
SKA2-208ENST00000583927 AMACRQ9UHK6 382 aa10□□□□□ -0.81
SKA2-208ENST00000583927 BTBD3Q9Y2F9 522 aa10□□□□□ -0.81
SKA2-208ENST00000583927 MSRB2Q9Y3D2 182 aa10□□□□□ -0.81
SKA2-208ENST00000583927 PCDHGA1Q9Y5H4 931 aa10□□□□□ -0.81
SKA2-208ENST00000583927 CELSR3Q9NYQ7 3312 aa10□□□□□ -0.81
SKA2-208ENST00000583927 SPTY2D1-AS1A0A0U1RR47 76 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 TMEM8BA6NDV4 472 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 POM121BA6NF01 834 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 IGLON5A6NGN9 336 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 DFFAO00273 331 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 NEMP1O14524 444 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TRAFD1O14545 582 aaPredicted RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 FPGTO14772 594 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 INSIG1O15503 277 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 BUB1BO60566 1050 aaPredicted RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 SOCS5O75159 536 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TM7SF2O76062 418 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 LCA5LO95447 670 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 ITGAVP06756 1048 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 SERPINA4P29622 427 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 MMP12P39900 470 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 HADHBP55084 474 aaKnown RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 ADKP55263 362 aaKnown RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 PFN3P60673 137 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 POLR2LP62875 67 aaKnown RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 FOXC1Q12948 553 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 LBRQ14739 615 aaKnown RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 LRRC38Q5VT99 294 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 ALG1LQ6GMV1 187 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 ARHGAP36Q6ZRI8 547 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 SLCO6A1Q86UG4 719 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 SLC22A18ASQ8N1D0 253 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 BBS5Q8N3I7 341 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TEX26Q8N6G2 289 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TC2NQ8N9U0 490 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 OR13H1Q8NG92 308 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 SLC35G2Q8TBE7 412 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 KLK6Q92876 244 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 GATA6Q92908 595 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 EXOC2Q96KP1 924 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TBATAQ96M53 351 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TSGA13Q96PP4 275 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 MGME1Q9BQP7 344 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
SKA2-208ENST00000583927 TRIM5Q9C035 493 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 FZD3Q9NPG1 666 aa9.99□□□□□ -0.81
SKA2-208ENST00000583927 MUSKO15146 869 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 RAD51BO15315 384 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 HTRA2O43464 458 aaPredicted RBP9.98□□□□□ -0.81
SKA2-208ENST00000583927 PIGNO95427 931 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CD48P09326 243 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CES1P23141 567 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CCNCP24863 283 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 RGRP47804 291 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 PEX5P50542 639 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 HNRNPKP61978 463 aaKnown RBP eCLIP9.98□□□□□ -0.81
SKA2-208ENST00000583927 BCL2L1Q07817 233 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 GALNT2Q10471 571 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 BNIP3Q12983 259 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 ILKQ13418 452 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 KRT81Q14533 505 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 ANKRD20A8PQ5CZ79 823 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 ERAP2Q6P179 960 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 Q6ZSR6 202 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CAMK1DQ8IU85 385 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 TP53INP2Q8IXH6 220 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CCDC170Q8IYT3 715 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 ATPAF2Q8N5M1 289 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 PCDH19Q8TAB3 1148 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CXorf40AQ8TE69 158 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 NSMCE1Q8WV22 266 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 MAML1Q92585 1016 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 MRFAP1L1Q96HT8 127 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 NUDCD1Q96RS6 583 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 PCDH12Q9NPG4 1184 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 KCTD5Q9NXV2 234 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 FTSJ1Q9UET6 329 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 GGT7Q9UJ14 662 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 ITM2BQ9Y287 266 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CA5BQ9Y2D0 317 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 PPIL1Q9Y3C6 166 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 CSNK1G3Q9Y6M4 447 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 BPTFQ12830 3046 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 UNC13CQ8NB66 2214 aa9.98□□□□□ -0.81
SKA2-208ENST00000583927 COL27A1Q8IZC6 1860 aaPredicted RBP9.98□□□□□ -0.81
SKA2-208ENST00000583927 TMEM110-MUSTN1A8MSY1 372 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms