RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 A0A1W2PRG0 241 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 TARSL2A2RTX5 802 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 GAGE12JA6NER3 117 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 CBY3A6NI87 242 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 IFITM10A6NMD0 228 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 LDLRAD4O15165 306 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 TLX3O43711 291 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 PRF1P14222 555 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 ALOX12P18054 663 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 CD72P21854 359 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 MLH1P40692 756 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 OLR1P78380 273 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 VEPH1Q14D04 833 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 MEA1Q16626 185 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 DPCR1Q3MIW9 517 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 SYTL3Q4VX76 610 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 SLC45A4Q5BKX6 768 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 C6orf10Q5SRN2 563 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 TXNDC8Q6A555 127 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 TMEM154Q6P9G4 183 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 GPAT4Q86UL3 456 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 ANKRD13BQ86YJ7 626 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 CAMK1DQ8IU85 385 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 OR4N2Q8NGD1 307 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 BICD2Q8TD16 824 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 CREB3L4Q8TEY5 395 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 POMGNT1Q8WZA1 660 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 COQ8BQ96D53 544 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 RNF183Q96D59 192 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 ZFYVE19Q96K21 471 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 MAP7D2Q96T17 732 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 BARD1Q99728 777 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 PIP5K1AQ99755 562 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 LBHD1Q9BQE6 289 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 STRA6Q9BX79 667 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 CCDC68Q9H2F9 335 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 SPAG4Q9NPE6 437 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 THSD1Q9NS62 852 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 HCFC1R1Q9NWW0 138 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 SEL1LQ9UBV2 794 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 A4GNTQ9UNA3 340 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 RAP2CQ9Y3L5 183 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 RABGAP1Q9Y3P9 1069 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 PSAT1Q9Y617 370 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 KCNE2Q9Y6J6 123 aa3.92□□□□□ -1.78
SMCHD1-209ENST00000583441 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 EIF3CLB5ME19 914 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 USP17L23D6RBM5 183 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 PTP4A3O75365 173 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 CTPS1P17812 591 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 NFKBIAP25963 317 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 RFC1P35251 1148 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 PRAMEP78395 509 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 ZNF91Q05481 1191 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 SLC18A2Q05940 514 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 RNPS1Q15287 305 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 ENTPD8Q5MY95 495 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 PIK3CD-AS1Q5SR53 167 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 NCEH1Q6PIU2 408 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 CPLX2Q6PUV4 134 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 SARM1Q6SZW1 724 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 CCDC129Q6ZRS4 1044 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 MOB3CQ70IA8 216 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 TBC1D26Q86UD7 250 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 CNTROBQ8N137 903 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 PDILTQ8N807 584 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 CMASQ8NFW8 434 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 MPLKIPQ8TAP9 179 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 SNRNP27Q8WVK2 155 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 USP6NLQ92738 828 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 ARHGEF2Q92974 986 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 INTS12Q96CB8 462 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 NUDT16L1Q9BRJ7 211 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 SDF4Q9BRK5 362 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 ITPAQ9BY32 194 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 POT1Q9NUX5 634 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 VPS28Q9UK41 221 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 PIAS3Q9Y6X2 628 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 UTYO14607 1347 aa3.91□□□□□ -1.78
SMCHD1-209ENST00000583441 ZMYM2Q9UBW7 1377 aa3.9□□□□□ -1.78
SMCHD1-209ENST00000583441 TYW5A2RUC4 315 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 LIPT2A6NK58 231 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 AP3D1O14617 1153 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 BCAT2O15382 392 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 TLR2O60603 784 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 TSPAN9O75954 239 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 MT-CYBP00156 380 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 TFP02787 698 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 KLKB1P03952 638 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 ENO3P13929 434 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 CDAP32320 146 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 RGS2P41220 211 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM115Q12893 351 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 PKP1Q13835 747 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 RUNX2Q13950 521 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 CRYMQ14894 314 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 PPP2R5BQ15173 497 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 SMTNL2Q2TAL5 461 aa3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 PLEKHO1Q53GL0 409 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-209ENST00000583441 FAM205BPQ63HN1 556 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms