RNA–Protein interactions for RNA: ENST00000582414.1

CACNB1-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-209ENST00000582414 CXorf40AQ8TE69 158 aa17.1■□□□□ 0.33
CACNB1-209ENST00000582414 CSPG4P5Q96PW8 444 aa17.1■□□□□ 0.33
CACNB1-209ENST00000582414 C1QTNF7Q9BXJ2 289 aa17.1■□□□□ 0.33
CACNB1-209ENST00000582414 SP110Q9HB58 689 aa17.1■□□□□ 0.33
CACNB1-209ENST00000582414 DKK4Q9UBT3 224 aa17.1■□□□□ 0.33
CACNB1-209ENST00000582414 ANAPC7Q9UJX3 599 aa17.1■□□□□ 0.33
CACNB1-209ENST00000582414 NEMP2A6NFY4 417 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 MYO1FO00160 1098 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 RIOK3O14730 519 aaKnown RBP17.09■□□□□ 0.33
CACNB1-209ENST00000582414 SCAMP1O15126 338 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
CACNB1-209ENST00000582414 AMPD1P23109 780 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 RENBPP51606 427 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 PDE1CQ14123 709 aaPredicted RBP17.09■□□□□ 0.33
CACNB1-209ENST00000582414 CCDC157Q569K6 752 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 TPRG1LQ5T0D9 272 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 TMCO4Q5TGY1 634 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 TMCO3Q6UWJ1 677 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 PROSER1Q86XN7 944 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 TP53INP2Q8IXH6 220 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 TP53I13Q8NBR0 393 aaPredicted RBP17.09■□□□□ 0.33
CACNB1-209ENST00000582414 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 HSPH1Q92598 858 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 ECHDC3Q96DC8 303 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 BTBD6Q96KE9 485 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 PSKH2Q96QS6 385 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 CINPQ9BW66 212 aaPredicted RBP17.09■□□□□ 0.33
CACNB1-209ENST00000582414 ATP13A3Q9H7F0 1226 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 PCDH18Q9HCL0 1135 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 PCDH12Q9NPG4 1184 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNB1-209ENST00000582414 ETNK2Q9NVF9 386 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 DNAJC28Q9NX36 388 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 NLGN3Q9NZ94 848 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 KLF15Q9UIH9 416 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 CSNK1G3Q9Y6M4 447 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 LRRK1Q38SD2 2015 aa17.09■□□□□ 0.33
CACNB1-209ENST00000582414 FREM2Q5SZK8 3169 aa17.08■□□□□ 0.33
CACNB1-209ENST00000582414 ANKRD36A6QL64 1941 aa17.08■□□□□ 0.33
CACNB1-209ENST00000582414 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 PEX11BO96011 259 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 IL4RP24394 825 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 SERPINA4P29622 427 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 IGFALSP35858 605 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 EIF4A3P38919 411 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 SLC10A7Q0GE19 358 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 EIF2B5Q13144 721 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 LBRQ14739 615 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 ASTE1Q2TB18 679 aaPredicted RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 ZNF542PQ5EBM4 170 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 SPECC1LQ69YQ0 1117 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 ZSWIM9Q86XI8 627 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 PDCD7Q8N8D1 485 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 FAM181AQ8N9Y4 354 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 OR8K1Q8NGG5 319 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 RFFLQ8WZ73 363 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 WRAP53Q9BUR4 548 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 DUSP23Q9BVJ7 150 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 CCDC86Q9H6F5 360 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 CAAP1Q9H8G2 361 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 MBNL1Q9NR56 388 aaKnown RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 RCOR3Q9P2K3 495 aaPredicted RBP17.08■□□□□ 0.32
CACNB1-209ENST00000582414 SEPT3Q9UH03 358 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 CHD6Q8TD26 2715 aa17.08■□□□□ 0.32
CACNB1-209ENST00000582414 ANKRD11Q6UB99 2663 aaPredicted RBP17.07■□□□□ 0.32
CACNB1-209ENST00000582414 FAM149AA5PLN7 773 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 TRABD2BA6NFA1 517 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 H3BM21 787 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 TRAFD1O14545 582 aaPredicted RBP17.07■□□□□ 0.32
CACNB1-209ENST00000582414 MUSKO15146 869 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 MAFKO60675 156 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 ALPPL2P10696 532 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 CKMT1AP12532 417 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 HSPA9P38646 679 aaKnown RBP17.07■□□□□ 0.32
CACNB1-209ENST00000582414 MMP12P39900 470 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 ARSEP51690 589 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 AP1S1P61966 158 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 POLR2LP62875 67 aaKnown RBP17.07■□□□□ 0.32
CACNB1-209ENST00000582414 E2F1Q01094 437 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 BCL2L1Q07817 233 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 TRIM14Q14142 442 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 SLC18A3Q16572 532 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 ERAP2Q6P179 960 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
CACNB1-209ENST00000582414 BTN2A2Q8WVV5 523 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 TBATAQ96M53 351 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 NSMCE3Q96MG7 304 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 USP29Q9HBJ7 922 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 ATP8A1Q9Y2Q0 1164 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 ZFHX4Q86UP3 3567 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 PKD1L2Q7Z442 2459 aa17.07■□□□□ 0.32
CACNB1-209ENST00000582414 SSU72P8A0A1W2PR75 194 aa17.06■□□□□ 0.32
CACNB1-209ENST00000582414 K7ESM1 405 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms