RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 MGME1Q9BQP7 344 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 STN1Q9H668 368 aaKnown RBP22.84■■□□□ 1.25
CCDC47-204ENST00000582252 KLC4Q9NSK0 619 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 AGO1Q9UL18 857 aaKnown RBP22.84■■□□□ 1.25
CCDC47-204ENST00000582252 ASB3Q9Y575 518 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 FAM95CA0A1B0GW59 222 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 TYW5A2RUC4 315 aaKnown RBP22.83■■□□□ 1.25
CCDC47-204ENST00000582252 C2orf71A6NGG8 1288 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 H3BNC9 293 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 SLC7A4O43246 635 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 IRF1P10914 325 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 MBL2P11226 248 aaPredicted RBP22.83■■□□□ 1.25
CCDC47-204ENST00000582252 STMN1P16949 149 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 PBX2P40425 430 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 ABCG1P45844 678 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 CSRP3P50461 194 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 RAB10P61026 200 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 MPP1Q00013 466 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 PDE12Q6L8Q7 609 aaKnown RBP22.83■■□□□ 1.25
CCDC47-204ENST00000582252 CYB5D1Q6P9G0 228 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 ZCCHC23Q6ZST2 131 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 ASRGL1Q7L266 308 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 PACS2Q86VP3 889 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 DENND6AQ8IWF6 608 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 OR7D4Q8NG98 312 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 SPON2Q9BUD6 331 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 ARHGEF3Q9NR81 526 aa22.83■■□□□ 1.25
CCDC47-204ENST00000582252 TRANK1O15050 2925 aa22.83■■□□□ 1.24
CCDC47-204ENST00000582252 A0A0D9SEW6 157 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 GRM6O15303 877 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 TGM5O43548 720 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 KLKB1P03952 638 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 PRKCGP05129 697 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 ATXN1LP0C7T5 689 aaKnown RBP22.82■■□□□ 1.24
CCDC47-204ENST00000582252 RPS24P62847 133 aaKnown RBP22.82■■□□□ 1.24
CCDC47-204ENST00000582252 POU4F1Q01851 419 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 CTBP1Q13363 440 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 TSNAXIP1Q2TAA8 658 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 PLD6Q8N2A8 252 aaKnown RBP22.82■■□□□ 1.24
CCDC47-204ENST00000582252 PIWIL2Q8TC59 973 aaKnown RBP22.82■■□□□ 1.24
CCDC47-204ENST00000582252 MICAL1Q8TDZ2 1067 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 PSKH2Q96QS6 385 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 GKN1Q9NS71 199 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 STOML2Q9UJZ1 356 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 ACOT9Q9Y305 439 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 ATG2AQ2TAZ0 1938 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 A0A087X1B8 175 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 MROH6A6NGR9 719 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 TMEM114B3SHH9 223 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 CLCN5P51795 746 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 PRAMEP78395 509 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 GPM6BQ13491 265 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 FAM91A1Q658Y4 838 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 RNF38Q9H0F5 515 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 LRMDAQ9H2I8 198 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 MFSD1Q9H3U5 465 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 TASP1Q9H6P5 420 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 RIMKLBQ9ULI2 386 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 TBC1D30Q9Y2I9 924 aa22.82■■□□□ 1.24
CCDC47-204ENST00000582252 ARIH1Q9Y4X5 557 aaPredicted RBP22.82■■□□□ 1.24
CCDC47-204ENST00000582252 C2orf78A6NCI8 922 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 HIDE1A8MVS5 230 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 CCDC22O60826 627 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 SAT1P21673 171 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 GABRB3P28472 473 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 SERPINB3P29508 390 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 ABCE1P61221 599 aaKnown RBP22.81■■□□□ 1.24
CCDC47-204ENST00000582252 IRF9Q00978 393 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 MSLNQ13421 630 aaPredicted RBP22.81■■□□□ 1.24
CCDC47-204ENST00000582252 DLG2Q15700 870 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 LILRA6Q6PI73 481 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 SLC41A1Q8IVJ1 513 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 TSPAN17Q96FV3 270 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 ELMO2Q96JJ3 720 aa22.81■■□□□ 1.24
CCDC47-204ENST00000582252 ACE2Q9BYF1 805 aaPredicted RBP22.81■■□□□ 1.24
CCDC47-204ENST00000582252 E2F8A0AVK6 867 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 NDST3O95803 873 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 GLUD1P00367 558 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 C1RP00736 705 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 TARSP26639 723 aaKnown RBP22.8■■□□□ 1.24
CCDC47-204ENST00000582252 ELF3P78545 371 aaPredicted RBP22.8■■□□□ 1.24
CCDC47-204ENST00000582252 ASPHQ12797 758 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 CAMK1Q14012 370 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 CES4AQ5XG92 561 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 PPP2R2DQ66LE6 453 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 CCDC149Q6ZUS6 474 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 TDHQ8IZJ6 230 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 TRPC7Q9HCX4 862 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 ZNF358Q9NW07 568 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 LNPEPQ9UIQ6 1025 aa22.8■■□□□ 1.24
CCDC47-204ENST00000582252 TRIM13O60858 407 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 CSPG5O95196 566 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 KITP10721 976 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 LEPRP48357 1165 aaKnown RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 AQP5P55064 265 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 ITGA9Q13797 1035 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 KRT72Q14CN4 511 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 GPATCH11Q8N954 259 aa22.79■■□□□ 1.24
CCDC47-204ENST00000582252 HJURPQ8NCD3 748 aaPredicted RBP22.79■■□□□ 1.24
CCDC47-204ENST00000582252 SCYL1Q96KG9 808 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms