RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 IGSF6O95976 241 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 GSRP00390 522 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 CCNCP24863 283 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 STIP1P31948 543 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 NOVA1P51513 510 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 RENBPP51606 427 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 EIF3EP60228 445 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 RHOAP61586 193 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 SNRPD1P62314 119 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 ZBTB16Q05516 673 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 FOXC1Q12948 553 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 ZNF235Q14590 738 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 C9orf64Q5T6V5 341 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 ZNF776Q68DI1 518 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 ANO7Q6IWH7 933 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 HOOK3Q86VS8 718 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 PGBD3Q8N328 593 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 CCNYQ8ND76 341 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 UBLCP1Q8WVY7 318 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 HMGB4Q8WW32 186 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 GDAP1L1Q96MZ0 367 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 CINPQ9BW66 212 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 CD248Q9HCU0 757 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 PRSS16Q9NQE7 514 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 FCF1Q9Y324 198 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 CELSR3Q9NYQ7 3312 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 MTSS1O43312 755 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 SMAD6O43541 496 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 NEBLO76041 1014 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 ADH1BP00325 375 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 GABRG2P18507 467 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 OAS2P29728 719 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 KCNJ1P48048 391 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 OTUD4Q01804 1114 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 RAD51Q06609 339 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 DHX9Q08211 1270 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 PPIDQ08752 370 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 XRCC4Q13426 336 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 LBRQ14739 615 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 NOMO1Q15155 1222 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 LLGL1Q15334 1064 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 TTC31Q49AM3 519 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 MARC1Q5VT66 337 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 FAM46CQ5VWP2 391 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 DENND2CQ68D51 928 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 KIAA1324Q6UXG2 1013 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 PPP1R21Q6ZMI0 780 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 ARHGAP36Q6ZRI8 547 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 TRMT10CQ7L0Y3 403 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 TMC3Q7Z5M5 1100 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 TP53INP2Q8IXH6 220 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 CCDC13Q8IYE1 715 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 OR2AP1Q8NGE2 309 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 SLC35B2Q8TB61 432 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 ACTL9Q8TC94 416 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 PRCCQ92733 491 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 PTPRN2Q92932 1015 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 ART4Q93070 314 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 OLFM3Q96PB7 478 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 EDEM2Q9BV94 578 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 PHACTR1Q9C0D0 580 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 STMN4Q9H169 189 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 RSPH9Q9H1X1 276 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 VPS45Q9NRW7 570 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 DNPEPQ9ULA0 475 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 SCML1Q9UN30 329 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 SDK1Q7Z5N4 2213 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 IGF2RP11717 2491 aa13.65□□□□□ -0.22
CSNK1D-220ENST00000581737 LNP1A1A4G5 178 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 HACD1B0YJ81 288 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 PATE3B3GLJ2 98 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 H7C0C1 242 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MATN3O15232 486 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 BNIP3LO60238 219 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 PPFIA2O75334 1257 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 ZNF217O75362 1048 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MAP3K6O95382 1288 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 CD160O95971 181 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 DNTTP04053 509 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 PRNPP04156 253 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 C7P10643 843 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 ACADMP11310 421 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 VAV1P15498 845 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 NDUFV2P19404 249 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 ECHS1P30084 290 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MMP13P45452 471 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MAPK8P45983 427 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms