RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CAPN7Q9Y6W3 813 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 TMEM272A0A1B0GTI8 110 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 ANKRD18BA2A2Z9 1011 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 LRRC53A6NM62 1247 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 B4DGG1 531 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 EIF3CLB5ME19 914 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 KLRF2D3W0D1 207 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 EBAG9O00559 213 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 GFPT2O94808 682 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 NDUFB8O95169 186 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 CCNDBP1O95273 360 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 ALPLP05186 524 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 T-ENOLP0DO92 83 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 IRF1P10914 325 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 LAMP2P13473 410 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 ENO3P13929 434 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 PSMA4P25789 261 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 RYKP34925 604 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 BSGP35613 385 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 ARL3P36405 182 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 AVPR1AP37288 418 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 EIF4A2Q14240 407 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 HIST2H2ACQ16777 129 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 HEPHL1Q6MZM0 1159 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 LRRC8EQ6NSJ5 796 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 CFAP161Q6P656 301 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 KLHL24Q6TFL4 600 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 DHX40Q8IX18 779 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 PDILTQ8N807 584 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 ZNF548Q8NEK5 533 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 MCPH1Q8NEM0 835 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 USP6NLQ92738 828 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 ZC3HAV1LQ96H79 300 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 BBS4Q96RK4 519 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 WDR77Q9BQA1 342 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 SDF4Q9BRK5 362 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 POLDIP3Q9BY77 421 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM234AQ9H0X4 552 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 TASP1Q9H6P5 420 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 MVB12BQ9H7P6 319 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 PRKRIP1Q9H875 184 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 EIF2B3Q9NR50 452 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 SEPT11Q9NVA2 429 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 LIMA1Q9UHB6 759 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 CARD8Q9Y2G2 431 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM96BQ9Y3D0 163 aa4.9□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM237BA0A1B0GVD1 139 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 TTC36A6NLP5 189 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 LIASO43766 372 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 ZC3H11AO75152 810 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 PTP4A3O75365 173 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 CLDN7O95471 211 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SCGB1D1O95968 90 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 TFP02787 698 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 LDHCP07864 332 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 MYZAPP0CAP1 466 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 TFPIP10646 304 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 ACADMP11310 421 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 PCNAP12004 261 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 ZNF8P17098 575 aaPredicted RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SRD5A1P18405 259 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 CDKN2AP42771 156 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 PPP3CCP48454 512 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 CXCR3P49682 368 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 DRG2P55039 364 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 NAP1L1P55209 391 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 CDH12P55289 794 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 LINC00205P59089 165 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 OLR1P78380 273 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 FRG1Q14331 258 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 PLEKHO1Q53GL0 409 aaPredicted RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 MANEAQ5SRI9 462 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 NCAPH2Q6IBW4 605 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SLC16A12Q6ZSM3 486 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 IKBIPQ70UQ0 350 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 GJC3Q8NFK1 279 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 GTF3C6Q969F1 213 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SMARCE1Q969G3 411 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 PABPC5Q96DU9 382 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 NLRP4Q96MN2 994 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 TIGD1Q96MW7 591 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SIN3AQ96ST3 1273 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 CDT1Q9H211 546 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 HIPK2Q9H2X6 1198 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 DECR2Q9NUI1 292 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 NCKIPSDQ9NZQ3 722 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 NDRG3Q9UGV2 375 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SWAP70Q9UH65 585 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 HAO1Q9UJM8 370 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 CORO1CQ9ULV4 474 aaPredicted RBP4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 SCINQ9Y6U3 715 aa4.89□□□□□ -1.63
SMCHD1-205ENST00000581383 KAT6BQ8WYB5 2073 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 LY6G6EA0A0G2JKS1 128 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 HSPB2A8KAH6 182 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 NPIPB11E5RHQ5 1161 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 AP3D1O14617 1153 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 MDM4O15151 490 aa4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 HNRNPCL1O60812 293 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-205ENST00000581383 MMP3P08254 477 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms