RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SLC7A4O43246 635 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 PGLSO95336 258 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 NDST3O95803 873 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 MMP2P08253 660 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 TPSB2P20231 275 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 COL9A1P20849 921 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 NEK3P51956 506 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 COPAP53621 1224 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 CAV1Q03135 178 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 ELP6Q0PNE2 266 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 LAMB3Q13751 1172 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 TPSAB1Q15661 275 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 PCSK7Q16549 785 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 PKN3Q6P5Z2 889 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 KIAA1324Q6UXG2 1013 aaKnown RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 USP45Q70EL2 814 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 ERN2Q76MJ5 926 aaKnown RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 HOOK3Q86VS8 718 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 C1orf210Q8IVY1 113 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 KLHDC8BQ8IXV7 354 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 DTWD2Q8NBA8 298 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 GLIS1Q8NBF1 620 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 RMDN1Q96DB5 314 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 ECHDC3Q96DC8 303 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 TBL1YQ9BQ87 522 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 LRRC1Q9BTT6 524 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 TDRD1Q9BXT4 1180 aaKnown RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 FAM129AQ9BZQ8 928 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 MKRN2Q9H000 416 aaKnown RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 PABPC3Q9H361 631 aaKnown RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 FBXL12Q9NXK8 326 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 UBP1Q9NZI7 540 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 WHRNQ9P202 907 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 FZD4Q9ULV1 537 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 ANKRD36A6QL64 1941 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 BDP1A6H8Y1 2624 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 MUC22E2RYF6 1773 aaPredicted RBP14.39□□□□□ -0.11
SKA2-205ENST00000580541 LOC285095A0A1B0GVY8 99 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 TSPAN11A1L157 253 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 PRR33A8MZF0 331 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 ANKRD66B4E2M5 251 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 DNALI1O14645 258 aaPredicted RBP14.39□□□□□ -0.11
SKA2-205ENST00000580541 MID1O15344 667 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 GPR37L1O60883 481 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 SUN1O94901 812 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 PIGNO95427 931 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 CPP00450 1065 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 FGF1P05230 155 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 CTSLP07711 333 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 CYP2A6P11509 494 aaPredicted RBP14.39□□□□□ -0.11
SKA2-205ENST00000580541 GABRG2P18507 467 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 AVPR2P30518 371 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 GKP32189 559 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 MAGEA6P43360 314 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 GRIA4P48058 902 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 MORF4L2Q15014 288 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 UGP2Q16851 508 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 ANO7Q6IWH7 933 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 KDELC1Q6UW63 502 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 RANBP10Q6VN20 620 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 HDDC3Q8N4P3 179 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 DNAAF3Q8N9W5 541 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 MCUQ8NE86 351 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 OXNAD1Q96HP4 312 aaPredicted RBP14.39□□□□□ -0.11
SKA2-205ENST00000580541 MRGPRX2Q96LB1 330 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 MLPHQ9BV36 600 aaPredicted RBP14.39□□□□□ -0.11
SKA2-205ENST00000580541 FAM126AQ9BYI3 521 aaPredicted RBP14.39□□□□□ -0.11
SKA2-205ENST00000580541 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 CD248Q9HCU0 757 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 ITM2CQ9NQX7 267 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 FAM114A2Q9NRY5 505 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 HACD3Q9P035 362 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 ANAPC5Q9UJX4 755 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 FBXO4Q9UKT5 387 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 SARDHQ9UL12 918 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 CHKBQ9Y259 395 aa14.39□□□□□ -0.11
SKA2-205ENST00000580541 UPK3BL1B0FP48 263 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 UPK3BL2E5RIL1 263 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 F5H423 210 aaPredicted RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 NEMP1O14524 444 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 FZD6O60353 706 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 RNASEH2AO75792 299 aaKnown RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 HEXIM1O94992 359 aaKnown RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 NDUFV2P19404 249 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 CDH17Q12864 832 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 TRAF2Q12933 501 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 USP39Q53GS9 565 aaKnown RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 IZUMO3Q5VZ72 239 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 ARMC3Q5W041 872 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 DUPD1Q68J44 220 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 KCTD11Q693B1 232 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.38□□□□□ -0.11
SKA2-205ENST00000580541 CEP128Q6ZU80 1094 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 KDELC2Q7Z4H8 507 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 PRUNE1Q86TP1 453 aa14.38□□□□□ -0.11
SKA2-205ENST00000580541 RASSF3Q86WH2 238 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms