RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 TREML2Q5T2D2 321 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 IL23RQ5VWK5 629 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 ZYG11AQ6WRX3 759 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 PLPPR4Q7Z2D5 763 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 GLT6D1Q7Z4J2 308 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 CLYBLQ8N0X4 340 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 VPS37AQ8NEZ2 397 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 SH3KBP1Q96B97 665 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 SH3GL1Q99961 368 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 ELOVL6Q9H5J4 265 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.68□□□□□ -0.226e-7■■■■■ 31.1
TRAPPC8-207ENST00000580104 TIMM22Q9Y584 194 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 PARP4Q9UKK3 1724 aaKnown RBP13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 LOC100506127A0A0U1RQW1 187 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 SNAP91O60641 907 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 PDSS2Q86YH6 399 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 GPSM1Q86YR5 675 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 STAG3L4Q8TBR4 150 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 GPBP1L1Q9HC44 474 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 SFMBT1Q9UHJ3 866 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 A8MX80 341 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 ADM5C9JUS6 153 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 IPO13O94829 963 aaKnown RBP13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 TNK2Q07912 1038 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 DPYSQ14117 519 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 SPDYE7PQ495Y7 208 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 GPR158Q5T848 1215 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 RSBN1Q5VWQ0 802 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 PKN3Q6P5Z2 889 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 GCNT7Q6ZNI0 430 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 ZNF410Q86VK4 478 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 OR2T34Q8NGX1 318 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 OR2T3Q8NH03 318 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 PEBP4Q96S96 227 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 SLC39A3Q9BRY0 314 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 RMND5AQ9H871 391 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 CXorf21Q9HAI6 301 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 ABCB10Q9NRK6 738 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 TMPRSS4Q9NRS4 437 aa13.68□□□□□ -0.22
TRAPPC8-207ENST00000580104 KLF11O14901 512 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SERPIND1P05546 499 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 AOC1P19801 751 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SP2Q02086 613 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 NRG1Q02297 640 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SYTL3Q4VX76 610 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 REP15Q6BDI9 236 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 TMC5Q6UXY8 1006 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SLC26A9Q7LBE3 791 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SPPL2AQ8TCT8 520 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 CATSPERZQ9NTU4 200 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 MOSPD1Q9UJG1 213 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 MSCO60682 206 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 MAGP20916 626 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 CDH3P22223 829 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 LMO2P25791 158 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 L1CAMP32004 1257 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 EXOC2Q96KP1 924 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 PPM1MQ96MI6 270 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SMAD5Q99717 465 aaKnown RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 DUSP16Q9BY84 665 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 TRNAU1APQ9NX07 287 aaKnown RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 MFHAS1Q9Y4C4 1052 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 FAM159BA6NKW6 160 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 RFPL1O75677 317 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 ABCB1P08183 1280 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 NCK1P16333 377 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 GM2AP17900 193 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 CCR10P46092 362 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SCNN1GP51170 649 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 DGUOKQ16854 277 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 CNTD1Q8N815 330 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 HBEGFQ99075 208 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 PKP2Q99959 881 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 ABCG8Q9H221 673 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 ATP6V1G1O75348 118 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 TAF1CQ15572 869 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 CARTPTQ16568 116 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 C9orf57Q5W0N0 161 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 TTC30BQ8N4P2 665 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 PSMA8Q8TAA3 256 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 KLQ9UEF7 1012 aa13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 LEF1Q9UJU2 399 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 RBMX2Q9Y388 322 aaKnown RBP13.67□□□□□ -0.22
TRAPPC8-207ENST00000580104 SCAMP3O14828 347 aaKnown RBP13.66□□□□□ -0.22
TRAPPC8-207ENST00000580104 MSI1O43347 362 aaKnown RBP13.66□□□□□ -0.22
TRAPPC8-207ENST00000580104 MZF1P28698 734 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC8-207ENST00000580104 IFNA8P32881 189 aa13.66□□□□□ -0.22
TRAPPC8-207ENST00000580104 HALP42357 657 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms