RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 FLRT1Q9NZU1 646 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CWC15Q9P013 229 aaKnown RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 AKAP7Q9P0M2 348 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 AMACRQ9UHK6 382 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 VPS51Q9UID3 782 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 OSGIN1Q9UJX0 560 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 NAP1L2Q9ULW6 460 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 KIF3AQ9Y496 699 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 POMT1Q9Y6A1 747 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FPGT-TNNI3KV9GXZ4 949 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 LRP6O75581 1613 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 FAM135BQ49AJ0 1406 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 CEP170BQ9Y4F5 1589 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-208ENST00000580019 COL15A1P39059 1388 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 JCADQ9P266 1359 aa3.25□□□□□ -1.89
KPNB1-208ENST00000580019 AOX1Q06278 1338 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF142P52746 1687 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 BIVM-ERCC5R4GMW8 1640 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 LOC105369274A0A096LPK9 316 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 LOC102723532A0A0G2JNH3 316 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TCRBV21S2A2A0A5A6 115 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 URADA6NGE7 173 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CDRT15L2A8MXV6 281 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CXorf49A8MYA2 514 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 A8MZ25 164 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 POLRMTO00411 1230 aaKnown RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 DNM1LO00429 736 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 WNT10BO00744 389 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PGRMC2O15173 223 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 VPS4BO75351 444 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 RECQL5O94762 991 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 HEXIM1O94992 359 aaKnown RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PRR35P0CG20 571 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 KRT13P13646 458 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ACP5P13686 325 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF8P17098 575 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 KCNA3P22001 575 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ITPKBP27987 946 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 RBL1P28749 1068 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 EPHA3P29320 983 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TTKP33981 857 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 THBS4P35443 961 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CASRP41180 1078 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PRPHP41219 470 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PIP4K2AP48426 406 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 GZMKP49863 264 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 RCAN1P53805 252 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 SLC12A3P55017 1021 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MFAP4P55083 255 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 LOXL3P58215 753 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CLRN1P58418 232 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 SLFN5Q08AF3 891 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 KLHL30Q0D2K2 578 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 RESTQ13127 1097 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ALCAMQ13740 583 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PTK6Q13882 451 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CCNIQ14094 377 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 UBXN2BQ14CS0 331 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TYSND1Q2T9J0 566 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 HSP90AA5PQ58FG0 334 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 NHSL2Q5HYW2 709 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MFSD14BQ5SR56 506 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MPP7Q5T2T1 576 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ANKRD40Q6AI12 368 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 SLC9A4Q6AI14 798 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CCDC144NLQ6NUI1 221 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CLEC9AQ6UXN8 241 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 LINC00696Q6ZRV3 163 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ADCK2Q7Z695 626 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MON1AQ86VX9 555 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D21Q8IYX1 336 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 OR4N4Q8N0Y3 316 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 SIX6OS1Q8N1H7 587 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TMIEQ8NEW7 156 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 FIBINQ8TAL6 211 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 DNAJB14Q8TBM8 379 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TBC1D15Q8TC07 691 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 KCNE4Q8WWG9 221 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF606Q8WXB4 792 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MRPS27Q92552 414 aaKnown RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MCRS1Q96EZ8 462 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 VPS39Q96JC1 886 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 FAR2Q96K12 515 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 PHACTR3Q96KR7 559 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 KLHL15Q96M94 604 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 WDR24Q96S15 920 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 FIZ1Q96SL8 496 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 SMOQ99835 787 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 FERMT1Q9BQL6 677 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 HERC2P3Q9BVR0 1158 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 CCDC106Q9BWC9 280 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TEX101Q9BY14 249 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 ANKRD2Q9GZV1 360 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 TTYH1Q9H313 450 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 OSGEPL1Q9H4B0 414 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 FBRSL1Q9HCM7 1045 aaKnown RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 NRIP3Q9NQ35 241 aa3.24□□□□□ -1.89
KPNB1-208ENST00000580019 MBNL1Q9NR56 388 aaKnown RBP3.24□□□□□ -1.89
KPNB1-208ENST00000580019 RRP7BPQ9NSQ0 103 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms