RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 DENND5AQ6IQ26 1287 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 BRAT1Q6PJG6 821 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 CAMK1DQ8IU85 385 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 GSPT2Q8IYD1 628 aaKnown RBP10.83□□□□□ -0.68
SS18-213ENST00000579640 NDUFAF2Q8N183 169 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 ZNF366Q8N895 744 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 IL17RCQ8NAC3 791 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 HNRNPLLQ8WVV9 542 aaKnown RBP10.83□□□□□ -0.68
SS18-213ENST00000579640 CAVIN3Q969G5 261 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 ECHDC3Q96DC8 303 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 SRPK1Q96SB4 655 aaKnown RBP10.83□□□□□ -0.68
SS18-213ENST00000579640 IL22Q9GZX6 179 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 PRSS16Q9NQE7 514 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 DKK3Q9UBP4 350 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 NDRG2Q9UN36 371 aaKnown RBP10.83□□□□□ -0.68
SS18-213ENST00000579640 CHKBQ9Y259 395 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 ANKRD36A6QL64 1941 aa10.83□□□□□ -0.68
SS18-213ENST00000579640 KANSL1LA0AUZ9 987 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 TSPAN11A1L157 253 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 KRBA1A5PL33 1030 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 SDR42E2A6NKP2 422 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 C1QTNF3-AMACRE9PGA6 284 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 RNASEH1O60930 286 aaKnown RBP10.82□□□□□ -0.68
SS18-213ENST00000579640 RNF40O75150 1001 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 LEFTY1O75610 366 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 KLF8O95600 359 aaPredicted RBP10.82□□□□□ -0.68
SS18-213ENST00000579640 PRLP01236 227 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 UGT2B4P06133 528 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 CHRNB1P11230 501 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 GRIA4P48058 902 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 POLR2LP62875 67 aaKnown RBP10.82□□□□□ -0.68
SS18-213ENST00000579640 PDIA2Q13087 525 aaKnown RBP10.82□□□□□ -0.68
SS18-213ENST00000579640 LAMB3Q13751 1172 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 ARSIQ5FYB1 569 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 TJAP1Q5JTD0 557 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 SIRPB2Q5JXA9 342 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 FNBP1LQ5T0N5 605 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 FAM46CQ5VWP2 391 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 CCDC25Q86WR0 208 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 CCNJLQ8IV13 435 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 ZNF687Q8N1G0 1237 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 STK40Q8N2I9 435 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 PAF1Q8N7H5 531 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 GRIN3AQ8TCU5 1115 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 PDCD6IPQ8WUM4 868 aaKnown RBP10.82□□□□□ -0.68
SS18-213ENST00000579640 VOPP1Q96AW1 172 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 RMDN1Q96DB5 314 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 PPP1R16AQ96I34 528 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 APOL2Q9BQE5 337 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 NAT9Q9BTE0 207 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 OSBPL6Q9BZF3 934 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 MTG2Q9H4K7 406 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 SAYSD1Q9NPB0 183 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 LTB4R2Q9NPC1 389 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 PPM1HQ9ULR3 514 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 PHTF1Q9UMS5 762 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 NCOR1O75376 2440 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 CKAP5Q14008 2032 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 EYSQ5T1H1 3165 aa10.82□□□□□ -0.68
SS18-213ENST00000579640 MAGEB16A2A368 324 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 CHURC1-FNTBB4DL54 471 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ANKRD66B4E2M5 251 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 CPP00450 1065 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 CTSLP07711 333 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 HOXB2P14652 356 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 H2AFXP16104 143 aaPredicted RBP10.81□□□□□ -0.68
SS18-213ENST00000579640 CD72P21854 359 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 TARSP26639 723 aaKnown RBP10.81□□□□□ -0.68
SS18-213ENST00000579640 GKP32189 559 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 EPHB1P54762 984 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 SESN2P58004 480 aaPredicted RBP10.81□□□□□ -0.68
SS18-213ENST00000579640 DHX9Q08211 1270 aaKnown RBP10.81□□□□□ -0.68
SS18-213ENST00000579640 OLIG2Q13516 323 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 CCDC38Q502W7 563 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ZNF805Q5CZA5 627 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 KDELC2Q7Z4H8 507 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 SIX5Q8N196 739 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 SLC25A41Q8N5S1 370 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 TXNDC5Q8NBS9 432 aaKnown RBP10.81□□□□□ -0.68
SS18-213ENST00000579640 LPCAT1Q8NF37 534 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 OR2T3Q8NH03 318 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 PTCD2Q8WV60 388 aaKnown RBP10.81□□□□□ -0.68
SS18-213ENST00000579640 SIGLEC10Q96LC7 697 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 PWWP2AQ96N64 755 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 TTC25Q96NG3 672 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 KLHL32Q96NJ5 620 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 RANBP9Q96S59 729 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 FAM129BQ96TA1 746 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ZDHHC4Q9NPG8 344 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 HACD3Q9P035 362 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 MUTYHQ9UIF7 546 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 PPIL1Q9Y3C6 166 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ANTXRLA6NF34 631 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ADAM23O75077 832 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ATG13O75143 517 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 AVILO75366 819 aa10.81□□□□□ -0.68
SS18-213ENST00000579640 ADH1BP00325 375 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms