RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 C1orf210Q8IVY1 113 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DTWD2Q8NBA8 298 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 BBOF1Q8ND07 529 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ARRDC2Q8TBH0 407 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RAB7BQ96AH8 199 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SPACA7Q96KW9 195 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 KLHL32Q96NJ5 620 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HHIPQ96QV1 700 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SRPK1Q96SB4 655 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TDRD1Q9BXT4 1180 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PABPC3Q9H361 631 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RAB6BQ9NRW1 208 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 DKK3Q9UBP4 350 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PHTF1Q9UMS5 762 aa11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RPL26L1Q9UNX3 145 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 UTP11Q9Y3A2 253 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MYLKQ15746 1914 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FANCMQ8IYD8 2048 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CCDC163A0A0D9SF12 145 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 C16orf96A6NNT2 1141 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SMAPO00193 183 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TTI1O43156 1089 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SLC7A4O43246 635 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RNASEH2AO75792 299 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PIGNO95427 931 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CTSLP07711 333 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CYP2A6P11509 494 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ETS1P14921 441 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GABRG2P18507 467 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NDUFV2P19404 249 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HLA-DPA1P20036 260 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RPL22P35268 128 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SKOR1P84550 965 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NIPAL4Q0D2K0 466 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ELP6Q0PNE2 266 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SEMA5AQ13591 1074 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PCSK7Q16549 785 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ERN2Q76MJ5 926 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CACUL1Q86Y37 369 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CAMK1DQ8IU85 385 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HDDC3Q8N4P3 179 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MMGT1Q8N4V1 131 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 IPMKQ8NFU5 416 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RMDN1Q96DB5 314 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FEM1CQ96JP0 617 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MRGPRX1Q96LB2 322 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CARD6Q9BX69 1037 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HDAC8Q9BY41 377 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FAM126AQ9BYI3 521 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 EIF2B3Q9NR50 452 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FBXL12Q9NXK8 326 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 EBF1Q9UH73 591 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FBXO4Q9UKT5 387 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FZD4Q9ULV1 537 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PCDHGC4Q9Y5F7 938 aa11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RIF1Q5UIP0 2472 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PLXNA2O75051 1894 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TSPAN11A1L157 253 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TTC24A2A3L6 582 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 EFCAB8A8MWE9 144 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 F5H423 210 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MID1O15344 667 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HTRA2O43464 458 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PMPCBO75439 489 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PGLSO95336 258 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 METTL18O95568 372 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 NDST3O95803 873 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MT-CYBP00156 380 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 EPOP01588 193 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 FGF1P05230 155 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 APRTP07741 180 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 C7P10643 843 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TPSB2P20231 275 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 HOXA6P31267 233 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GKP32189 559 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 GRIA4P48058 902 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 VPS41P49754 854 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CDK16Q00536 496 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 CALCOCO2Q13137 446 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TRIP13Q15645 432 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TPSAB1Q15661 275 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 USP39Q53GS9 565 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PPP1R21Q6ZMI0 780 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 USP45Q70EL2 814 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TTC7BQ86TV6 843 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PRPF39Q86UA1 669 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 C11orf74Q86VG3 221 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 RASSF3Q86WH2 238 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SPATA22Q8NHS9 363 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ERLEC1Q96DZ1 483 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SNF8Q96H20 258 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ZNF419Q96HQ0 510 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 TBL1YQ9BQ87 522 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 MKRN2Q9H000 416 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 ETNK1Q9HBU6 452 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 SGK2Q9HBY8 427 aa11.36□□□□□ -0.59
CDK5RAP3-210ENST00000578733 PRMT8Q9NR22 394 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms