RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 FOXJ1Q92949 421 aa21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 FATE1Q969F0 183 aa21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 TUBGCP5Q96RT8 1024 aa21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 WRAP53Q9BUR4 548 aaKnown RBP21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 BRD8Q9H0E9 1235 aa21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 ATP8A1Q9Y2Q0 1164 aa21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 PCDHGA5Q9Y5G8 931 aa21.9■■□□□ 1.1
CDC42EP4-203ENST00000578516 CACNA1EQ15878 2313 aa21.89■■□□□ 1.1
CDC42EP4-203ENST00000578516 A8MX80 341 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 UPK3BL1B0FP48 263 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 UPK3BL2E5RIL1 263 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 KCNK3O14649 394 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 AREL1O15033 823 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 NEBLO76041 1014 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 RBL1P28749 1068 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 CXCR5P32302 372 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 NR2C2P49116 596 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 EIF3EP60228 445 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 KLF1Q13351 362 aaPredicted RBP21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 KCTD19Q17RG1 926 aaPredicted RBP21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 TRIM61Q5EBN2 209 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 SPDYCQ5MJ68 293 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 TTC7BQ86TV6 843 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 PAF1Q8N7H5 531 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 TRIM58Q8NG06 486 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 C1orf216Q8TAB5 229 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 ATG4AQ8WYN0 398 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 ECHDC3Q96DC8 303 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 POLR1EQ9GZS1 481 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 PCDH12Q9NPG4 1184 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 DKK3Q9UBP4 350 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 COQ6Q9Y2Z9 468 aa21.89■■□□□ 1.09
CDC42EP4-203ENST00000578516 MYLKQ15746 1914 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 PTPRZ1P23471 2315 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 SLC31A1O15431 190 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 GDF9O60383 454 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 PDHA1P08559 390 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 CD68P34810 354 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 CD86P42081 329 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 IRX4P78413 519 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 ZNF284Q2VY69 593 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 SLC45A4Q5BKX6 768 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 ZNF569Q5MCW4 686 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 WDR45BQ5MNZ6 344 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 SYCP2LQ5T4T6 812 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 CFAP58Q5T655 872 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 SEL1L2Q5TEA6 688 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 ALG1LQ6GMV1 187 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 PRR23CQ6ZRP0 262 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 PCED1AQ9H1Q7 454 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 CAAP1Q9H8G2 361 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 PREBQ9HCU5 417 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 TM9SF3Q9HD45 589 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 EFR3BQ9Y2G0 817 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 RAI2Q9Y5P3 530 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 FRYLO94915 3013 aa21.88■■□□□ 1.09
CDC42EP4-203ENST00000578516 A0A1W2PPC4 97 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 GOLGA8CPA6NN73 597 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 RAD51BO15315 384 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 HTRA2O43464 458 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 LATO43561 262 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 TJP3O95049 919 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 CPP00450 1065 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 WNT1P04628 370 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 CTPS1P17812 591 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 CD27P26842 260 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 CCR5P51681 352 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 SKOR1P84550 965 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 BNC1Q01954 994 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 RALGDSQ12967 914 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 CSRP2Q16527 193 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 UGP2Q16851 508 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 TMEM259Q4ZIN3 620 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 TRIM69Q86WT6 500 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 HORMAD1Q86X24 394 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 SPATA22Q8NHS9 363 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 ZNF641Q96N77 438 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 RBM15Q96T37 977 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 VPS45Q9NRW7 570 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 PCDHB9Q9Y5E1 797 aa21.87■■□□□ 1.09
CDC42EP4-203ENST00000578516 LNP1A1A4G5 178 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 IGLON5A6NGN9 336 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 NEMP1O14524 444 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 ZSCAN12O43309 604 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 MMP20O60882 483 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 ATP1A1P05023 1023 aaKnown RBP21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 ZNF806P0C7X5 589 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 RBP3P10745 1247 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 NFKB1P19838 968 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 XPAP23025 273 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 HOXD11P31277 338 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 CETN2P41208 172 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 PRPF39Q86UA1 669 aaKnown RBP21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 SLC13A5Q86YT5 568 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 ZNF567Q8N184 647 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 HTR3CQ8WXA8 447 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 SMARCAL1Q9NZC9 954 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 UBP1Q9NZI7 540 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 CHKBQ9Y259 395 aa21.86■■□□□ 1.09
CDC42EP4-203ENST00000578516 KNL1Q8NG31 2342 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms