RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GRAMD4Q6IC98 578 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 PARM1Q6UWI2 310 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 ARFGAP2Q8N6H7 521 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 ST13P5Q8NFI4 369 aaPredicted RBP18.71■□□□□ 0.59
PRKCA-203ENST00000578063 SUSD6Q92537 303 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 SMYD2Q9NRG4 433 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 ZFATQ9P243 1243 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 EPS15L1Q9UBC2 864 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 ERVW-1Q9UQF0 538 aa18.71■□□□□ 0.59
PRKCA-203ENST00000578063 DOCK8Q8NF50 2099 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 TRIOBPQ9H2D6 2365 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 IQANK1A0A1B0GTG1 560 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 CXorf49A8MYA2 514 aaPredicted RBP18.7■□□□□ 0.58
PRKCA-203ENST00000578063 SOX1O00570 391 aaPredicted RBP18.7■□□□□ 0.58
PRKCA-203ENST00000578063 TRIM24O15164 1050 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 PIAS1O75925 651 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 NNMTP40261 264 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 GRM2Q14416 872 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 PDPK2PQ6A1A2 396 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 RASSF3Q86WH2 238 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 CYP4X1Q8N118 509 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 FGF14Q92915 247 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 PEX13Q92968 403 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 RMDN1Q96DB5 314 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 PLA2G2FQ9BZM2 168 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 TNKS2Q9H2K2 1166 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 ATP13A3Q9H7F0 1226 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 TREX1Q9NSU2 369 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 SENP1Q9P0U3 644 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 USP15Q9Y4E8 981 aaPredicted RBP18.7■□□□□ 0.58
PRKCA-203ENST00000578063 ACTL7BQ9Y614 415 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 MYOFQ9NZM1 2061 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 MIA3Q5JRA6 1907 aa18.7■□□□□ 0.58
PRKCA-203ENST00000578063 OTOL1A6NHN0 477 aaPredicted RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 PRLP01236 227 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 SRPRAP08240 638 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 RPL26P61254 145 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 BCL2L1Q07817 233 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 EIF4HQ15056 248 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 DLG2Q15700 870 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 ACCSLQ4AC99 568 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 TSTD2Q5T7W7 516 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 KIAA0930Q6ICG6 404 aaPredicted RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 KCNMB4Q86W47 210 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 PLPP6Q8IY26 295 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 UNC5BQ8IZJ1 945 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 LPCAT1Q8NF37 534 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 BRSK1Q8TDC3 778 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 MYO19Q96H55 970 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 ZNF778Q96MU6 729 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 TUBGCP5Q96RT8 1024 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 CIPCQ9C0C6 399 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 C20orf96Q9NUD7 363 aaPredicted RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 EVLQ9UI08 416 aaPredicted RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 RPL26L1Q9UNX3 145 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 SLC8A2Q9UPR5 921 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 MROH6A6NGR9 719 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 FZD6O60353 706 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 DLDP09622 509 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 ERVK-10P10266 1014 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 KRT15P19012 456 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 SERPINA4P29622 427 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 HPDP32754 393 aaPredicted RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 SERPINB9P50453 376 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 GRM3Q14832 879 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 ARMC12Q5T9G4 340 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 LGSNQ5TDP6 509 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 EMC10Q5UCC4 262 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 KDM7AQ6ZMT4 941 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 RYBPQ8N488 228 aaPredicted RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 BLOC1S5Q8TDH9 187 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 PDCD6IPQ8WUM4 868 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 LRCH3Q96II8 777 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 MRGPRX3Q96LB0 322 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 TRMT61BQ9BVS5 477 aaKnown RBP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.69■□□□□ 0.58
PRKCA-203ENST00000578063 SLCO3A1Q9UIG8 710 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 RIMKLBQ9ULI2 386 aa18.69■□□□□ 0.58
PRKCA-203ENST00000578063 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.68■□□□□ 0.58
PRKCA-203ENST00000578063 ANKRD66B4E2M5 251 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 HTRA2O43464 458 aaPredicted RBP18.68■□□□□ 0.58
PRKCA-203ENST00000578063 KRT37O76014 449 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 PGLSO95336 258 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 PDHA1P08559 390 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 GDI1P31150 447 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 EIF2DP41214 584 aaKnown RBP18.68■□□□□ 0.58
PRKCA-203ENST00000578063 GRIA4P48058 902 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 PPP2R2AP63151 447 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 RAD51Q06609 339 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 MYLK3Q32MK0 819 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 CARD16Q5EG05 197 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 ESRP1Q6NXG1 681 aaKnown RBP18.68■□□□□ 0.58
PRKCA-203ENST00000578063 TRABD2AQ86V40 505 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 EXOC3L1Q86VI1 746 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 OR6K2Q8NGY2 324 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 NSMCE4AQ9NXX6 385 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 TXNDC16Q9P2K2 825 aa18.68■□□□□ 0.58
PRKCA-203ENST00000578063 HECAQ9UBI9 543 aaPredicted RBP18.68■□□□□ 0.58
PRKCA-203ENST00000578063 CCDC78A2IDD5 438 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms