RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 NOL6Q9H6R4 1146 aaKnown RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 CAAP1Q9H8G2 361 aa16.23■□□□□ 0.19
VAPA-204ENST00000577901 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.23■□□□□ 0.19
VAPA-204ENST00000577901 CWC15Q9P013 229 aaKnown RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 ZFR2Q9UPR6 939 aaKnown RBP16.23■□□□□ 0.19
VAPA-204ENST00000577901 TEX51A0A1B0GUA7 166 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 ARHGAP42A6NI28 874 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 RNF103O00237 685 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 OPA1O60313 960 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 CD160O95971 181 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 GIMD1P0DJR0 217 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 TCF4P15884 667 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 MAGEA1P43355 309 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 CXADRP78310 365 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 SLC25A11Q02978 314 aaKnown RBP16.22■□□□□ 0.19
VAPA-204ENST00000577901 SERINC3Q13530 473 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 KRT81Q14533 505 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 INO80DQ53TQ3 878 aaPredicted RBP16.22■□□□□ 0.19
VAPA-204ENST00000577901 ARSIQ5FYB1 569 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 CDCP2Q5VXM1 449 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 SEL1L3Q68CR1 1132 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 GCNT7Q6ZNI0 430 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 POLNQ7Z5Q5 900 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 ABI3BPQ7Z7G0 1075 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 TMTC1Q8IUR5 882 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 PLPP6Q8IY26 295 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 SLC22A18ASQ8N1D0 253 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 RYBPQ8N488 228 aaPredicted RBP16.22■□□□□ 0.19
VAPA-204ENST00000577901 LZTR1Q8N653 840 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 GRIN3AQ8TCU5 1115 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 IFT43Q96FT9 208 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 LGMNQ99538 433 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 LRRC19Q9H756 370 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 IL36AQ9UHA7 158 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 FCF1Q9Y324 198 aaKnown RBP16.22■□□□□ 0.19
VAPA-204ENST00000577901 KNTC1P50748 2209 aa16.22■□□□□ 0.19
VAPA-204ENST00000577901 TMEM110-MUSTN1A8MSY1 372 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 ZNF821O75541 412 aaPredicted RBP16.21■□□□□ 0.19
VAPA-204ENST00000577901 LCA5LO95447 670 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 MPOP05164 745 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 KRT7P08729 469 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 MYF5P13349 255 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 MAN1A1P33908 653 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 PAPOLAP51003 745 aaKnown RBP16.21■□□□□ 0.19
VAPA-204ENST00000577901 SNRPD1P62314 119 aaKnown RBP16.21■□□□□ 0.19
VAPA-204ENST00000577901 DPYSQ14117 519 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 MESDQ14696 234 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 TMEM259Q4ZIN3 620 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 TXNRD3NBQ6F5E7 133 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 DPY19L3Q6ZPD9 716 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 Q6ZSR6 202 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 ZNF248Q8NDW4 579 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 NAF1Q96HR8 494 aaKnown RBP16.21■□□□□ 0.19
VAPA-204ENST00000577901 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 CELF6Q96J87 481 aaKnown RBP16.21■□□□□ 0.19
VAPA-204ENST00000577901 APOLD1Q96LR9 279 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 DEPDC7Q96QD5 511 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 HEPHQ9BQS7 1158 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 SLC39A8Q9C0K1 460 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 NLGN3Q9NZ94 848 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 HECAQ9UBI9 543 aaPredicted RBP16.21■□□□□ 0.19
VAPA-204ENST00000577901 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.19
VAPA-204ENST00000577901 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 A6NNZ2 444 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 SCAMP1O15126 338 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 LEFTY1O75610 366 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 MTA2O94776 668 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 IPO7O95373 1038 aaKnown RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 GP1BAP07359 652 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 CDC25BP30305 580 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 CCNHP51946 323 aaPredicted RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 CDH6P55285 790 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 PCBP4P57723 403 aaKnown RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 TCEAL1Q15170 157 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 ZFYVE27Q5T4F4 411 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 TMCO3Q6UWJ1 677 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 LEKR1Q6ZMV7 388 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 PTAR1Q7Z6K3 402 aaPredicted RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 DCP2Q8IU60 420 aaKnown RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 MAP7D3Q8IWC1 876 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 LSMEM2Q8N112 164 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 ZNF843Q8N446 348 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 FAM181AQ8N9Y4 354 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 KCTD6Q8NC69 237 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 FAM174AQ8TBP5 190 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 BMFQ96LC9 184 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 ZNF578Q96N58 590 aaPredicted RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 CSPG4P5Q96PW8 444 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 TM6SF2Q9BZW4 377 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 KLC2Q9H0B6 622 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 ABCG4Q9H172 646 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 PCDH18Q9HCL0 1135 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 DNAJC28Q9NX36 388 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 RCOR3Q9P2K3 495 aaPredicted RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 IMPACTQ9P2X3 320 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 UBA2Q9UBT2 640 aaPredicted RBP16.2■□□□□ 0.18
VAPA-204ENST00000577901 PCDHA13Q9Y5I0 950 aa16.2■□□□□ 0.18
VAPA-204ENST00000577901 ATMQ13315 3056 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms