RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 RAB11FIP2Q7L804 512 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 DNAAF5Q86Y56 855 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 TP53I13Q8NBR0 393 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 TTC9Q92623 222 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 C11orf70Q9BRQ4 267 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 WRAP53Q9BUR4 548 aaKnown RBP14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 NAA15Q9BXJ9 866 aaKnown RBP14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 CPEB1Q9BZB8 566 aaKnown RBP14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 AKAP7Q9P0M2 348 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 ATXN7L1Q9ULK2 861 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 GPR34Q9UPC5 381 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 ACTL7AQ9Y615 435 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 TRPM6Q9BX84 2022 aa14.36□□□□□ -0.11
SMARCD2-205ENST00000577686 HELZ2Q9BYK8 2649 aaKnown RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 CELSR3Q9NYQ7 3312 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 C2CD4BA6NLJ0 364 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 D6RAR5 112 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 CACNB4O00305 520 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 NTN3O00634 580 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 GFPT2O94808 682 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 TNFP01375 233 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 CYP1A1P04798 512 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 SFTPCP11686 197 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 MTM1Q13496 603 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 LY6DQ14210 128 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 IRF4Q15306 451 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 TPRG1LQ5T0D9 272 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 BRAT1Q6PJG6 821 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 ENPP7Q6UWV6 458 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 LEKR1Q6ZMV7 388 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 USP53Q70EK8 1073 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 ZSCAN1Q8NBB4 408 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 ANKRD20A12PQ8NF67 263 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 PCDH19Q8TAB3 1148 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 CCDC74AQ96AQ1 378 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 WDR92Q96MX6 357 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 ZNF641Q96N77 438 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 TUBGCP5Q96RT8 1024 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 ARHGAP9Q9BRR9 750 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 FAM117AQ9C073 453 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 TCEAL2Q9H3H9 227 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 ADAM22Q9P0K1 906 aa14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 UBA2Q9UBT2 640 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 NOCTQ9UK39 431 aaKnown RBP14.35□□□□□ -0.11
SMARCD2-205ENST00000577686 FAM170AA1A519 330 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 RASA4BC9J798 803 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 PDE2AO00408 941 aaPredicted RBP14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 RASA4O43374 803 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 RPLP0P05388 317 aaKnown RBP14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 NFKBIAP25963 317 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 SERPINA4P29622 427 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 CCKBRP32239 447 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 SOX5P35711 763 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 STAT1P42224 750 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 GSCP56915 257 aaPredicted RBP14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 SRP54P61011 504 aaKnown RBP14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 CLN3Q13286 438 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 HSP90AA4PQ58FG1 418 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 TCP11X2Q5H9J9 407 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 RD3Q7Z3Z2 195 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 KYQ8NBH2 561 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 GPT2Q8TD30 523 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 CENPIQ92674 756 aaPredicted RBP14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 COL26A1Q96A83 441 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 HMCESQ96FZ2 354 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 CLPBQ9H078 707 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 CLMPQ9H6B4 373 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 SIRPGQ9P1W8 387 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
SMARCD2-205ENST00000577686 BPTFQ12830 3046 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 CFAP69A5D8W1 941 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 FAM72CH0Y354 149 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 SLC28A2O43868 658 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 CREB3O43889 395 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 LIPCP11150 499 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 TIMP2P16035 220 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 UGT1A5P35504 534 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 HDAC4P56524 1084 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 POLR2FP61218 127 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 KCNC4Q03721 635 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 SERINC3Q13530 473 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 PEX6Q13608 980 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 AGERQ15109 404 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 UGP2Q16851 508 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 ALG11Q2TAA5 492 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 DPCR1Q3MIW9 517 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 ARTNQ5T4W7 220 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 FAM72AQ5TYM5 149 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 FAM72DQ6L9T8 149 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.12
SMARCD2-205ENST00000577686 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms