RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PMPCBO75439 489 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 DDNO94850 711 aaPredicted RBP15.77■□□□□ 0.11
NUP88-207ENST00000573584 SNRPB2P08579 225 aaKnown RBP15.77■□□□□ 0.11
NUP88-207ENST00000573584 CPB1P15086 417 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 PAMP19021 973 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 CDH2P19022 906 aaPredicted RBP15.77■□□□□ 0.11
NUP88-207ENST00000573584 PLK1P53350 603 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 TXNL4AP83876 142 aaKnown RBP15.77■□□□□ 0.11
NUP88-207ENST00000573584 ZNF33AQ06730 810 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 TRAP1Q12931 704 aaKnown RBP15.77■□□□□ 0.11
NUP88-207ENST00000573584 LAYNQ6UX15 382 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 CUZD1Q86UP6 607 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 ALDH16A1Q8IZ83 802 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 SLCO4A1Q96BD0 722 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 PREBQ9HCU5 417 aa15.77■□□□□ 0.11
NUP88-207ENST00000573584 PTGESO14684 152 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 TRMUO75648 421 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 IPO13O94829 963 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 MTX3Q5HYI7 312 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 OLFML2BQ68BL8 750 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 NEPROQ6NW34 567 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 BHLHA9Q7RTU4 235 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 TAC4Q86UU9 113 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 MYO1HQ8N1T3 1032 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 SNX31Q8N9S9 440 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 SLC29A1Q99808 456 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 TMEM79Q9BSE2 394 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 FSD1LQ9BXM9 530 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 NOL11Q9H8H0 719 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 SARDHQ9UL12 918 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 H6PDO95479 791 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 PYGLP06737 847 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 NELFEP18615 380 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 SLC7A1P30825 629 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 EPHX2P34913 555 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 SEPT6Q14141 434 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 TBC1D25Q3MII6 688 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 RBM20Q5T481 1227 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 BTBD8Q5XKL5 378 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 DPP9Q86TI2 863 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 PPWD1Q96BP3 646 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 CCDC126Q96EE4 140 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 PHF21BQ96EK2 531 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 CIB1Q99828 191 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 CAAP1Q9H8G2 361 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 TIMMDC1Q9NPL8 285 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 ADARB2Q9NS39 739 aaKnown RBP15.76■□□□□ 0.11
NUP88-207ENST00000573584 ARHGEF38Q9NXL2 777 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 TLL2Q9Y6L7 1015 aa15.76■□□□□ 0.11
NUP88-207ENST00000573584 A8MT66 165 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 FAM163BP0C2L3 166 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 CDK4P11802 303 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 GEMP55040 296 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 PSMD5Q16401 504 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 TECRLQ5HYJ1 363 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 AGAP9Q5VTM2 703 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 KRT80Q6KB66 452 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 CARM1Q86X55 608 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 PTCD2Q8WV60 388 aaKnown RBP15.75■□□□□ 0.11
NUP88-207ENST00000573584 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
NUP88-207ENST00000573584 ENTPD7Q9NQZ7 604 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 TREX1Q9NSU2 369 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 GALNT8Q9NY28 637 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 CD300AQ9UGN4 299 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 TCRBV3S1A0A5B6 114 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 MBLAC1A4D2B0 266 aaPredicted RBP15.75■□□□□ 0.11
NUP88-207ENST00000573584 MRASO14807 208 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 ZNF23P17027 643 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 CHRNA4P43681 627 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 LHX1P48742 406 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 HPCAP84074 193 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 TWF2Q6IBS0 349 aaKnown RBP15.75■□□□□ 0.11
NUP88-207ENST00000573584 PBXIP1Q96AQ6 731 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 IL12RB2Q99665 862 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 EFHD1Q9BUP0 239 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 SLC25A23Q9BV35 468 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 RHOBTB2Q9BYZ6 727 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 CROTQ9UKG9 612 aa15.75■□□□□ 0.11
NUP88-207ENST00000573584 HHLA1C9JL84 531 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 DYNC1LI2O43237 492 aaPredicted RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 NRP2O60462 931 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 CCDC166P0CW27 439 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 ADRA1AP35348 466 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 PFKPQ01813 784 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 ZNF789Q5FWF6 425 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 SAMD4BQ5PRF9 694 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 KIAA0930Q6ICG6 404 aaPredicted RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 KLC3Q6P597 504 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 ARHGAP12Q8IWW6 846 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 NUP93Q8N1F7 819 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 RIN3Q8TB24 985 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 GRIN3AQ8TCU5 1115 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 ZNF512Q96ME7 567 aaPredicted RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 PPP1R10Q96QC0 940 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 OLFM1Q99784 485 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 MYRFQ9Y2G1 1151 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 MRPL42Q9Y6G3 142 aaKnown RBP15.74■□□□□ 0.11
NUP88-207ENST00000573584 MATN3O15232 486 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 MAFKO60675 156 aa15.74■□□□□ 0.11
NUP88-207ENST00000573584 MT-CO1P00395 513 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms