RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 UGP2Q16851 508 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 TXNRD3NBQ6F5E7 133 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 BRAT1Q6PJG6 821 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 POLNQ7Z5Q5 900 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 OR4C6Q8NH72 309 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNF564Q8TBZ8 553 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 ASB12Q8WXK4 309 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 TSC1Q92574 1164 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 CENPTQ96BT3 561 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNF641Q96N77 438 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 CSPG4P5Q96PW8 444 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 TUBGCP5Q96RT8 1024 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 DNAJC7Q99615 494 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 RBSNQ9H1K0 784 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 PCDH12Q9NPG4 1184 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 MBNL1Q9NR56 388 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 ETNK2Q9NVF9 386 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 CTTNBP2NLQ9P2B4 639 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 WDFY3Q8IZQ1 3526 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TSPAN11A1L157 253 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 LZTS3O60299 673 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 NEBLO76041 1014 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 CSF2P04141 144 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TPM1P09493 284 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 CDK4P11802 303 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 C6P13671 934 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 JUNDP17535 347 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 IGFALSP35858 605 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 CSNK1DP48730 415 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 RENBPP51606 427 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 CDH6P55285 790 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 PFN3P60673 137 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 SLC25A11Q02978 314 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 SLC10A7Q0GE19 358 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 PTK2BQ14289 1009 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 LRRC14Q15048 493 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 IRF4Q15306 451 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 HADHQ16836 314 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 PROX2Q3B8N5 592 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TMEM52BQ4KMG9 183 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TPRG1LQ5T0D9 272 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 HES3Q5TGS1 186 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TMPRSS12Q86WS5 348 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 ATPAF2Q8N5M1 289 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TP53I13Q8NBR0 393 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNF548Q8NEK5 533 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 HCAR2Q8TDS4 363 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 LMX1AQ8TE12 382 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TEKT4Q8WW24 435 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 CHP1Q99653 195 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 TRIM5Q9C035 493 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 PCDH18Q9HCL0 1135 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 GPR27Q9NS67 375 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNHIT6Q9NWK9 470 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 NLGN3Q9NZ94 848 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 SEPT3Q9UH03 358 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 NENFQ9UMX5 172 aa12.81□□□□□ -0.36
NPLOC4-213ENST00000573519 MAP1BP46821 2468 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 SPEGQ15772 3267 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 TTC24A2A3L6 582 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 TRABD2BA6NFA1 517 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 A8MX80 341 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 SCAMP1O15126 338 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 MUSKO15146 869 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 MFAP3LO75121 409 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 MYF5P13349 255 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 NME1P15531 152 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ACP1P24666 158 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 SERPINB6P35237 376 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 LIG3P49916 1009 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ILKQ13418 452 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ASTE1Q2TB18 679 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ZSWIM9Q86XI8 627 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 PROSER1Q86XN7 944 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 CPNE8Q86YQ8 564 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 RBFAQ8N0V3 343 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 BBS5Q8N3I7 341 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 PDCD6IPQ8WUM4 868 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 NSMCE1Q8WV22 266 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 CTNNBL1Q8WYA6 563 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 APOLD1Q96LR9 279 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNF599Q96NL3 588 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ABHD10Q9NUJ1 306 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 APOBEC3BQ9UH17 382 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 KLF15Q9UIH9 416 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 ATP8A1Q9Y2Q0 1164 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 DOCK9Q9BZ29 2069 aa12.8□□□□□ -0.36
NPLOC4-213ENST00000573519 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 ZFHX4Q86UP3 3567 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms