RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 COMTP21964 271 aa8.78□□□□□ -1
SMG6-210ENST00000572205 KDELR1P24390 212 aa8.78□□□□□ -1
SMG6-210ENST00000572205 MAT2AP31153 395 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 GARSP41250 739 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 ARHGAP25P42331 645 aa8.78□□□□□ -1
SMG6-210ENST00000572205 CDKN2BP42772 138 aa8.78□□□□□ -1
SMG6-210ENST00000572205 RHOAP61586 193 aa8.78□□□□□ -1
SMG6-210ENST00000572205 SNRPD1P62314 119 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 MESDQ14696 234 aa8.78□□□□□ -1
SMG6-210ENST00000572205 HLA-BQ31612 363 aa8.78□□□□□ -1
SMG6-210ENST00000572205 SYCP2LQ5T4T6 812 aa8.78□□□□□ -1
SMG6-210ENST00000572205 LRRC38Q5VT99 294 aa8.78□□□□□ -1
SMG6-210ENST00000572205 NEK5Q6P3R8 708 aa8.78□□□□□ -1
SMG6-210ENST00000572205 TMCO3Q6UWJ1 677 aa8.78□□□□□ -1
SMG6-210ENST00000572205 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
SMG6-210ENST00000572205 HORMAD1Q86X24 394 aa8.78□□□□□ -1
SMG6-210ENST00000572205 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
SMG6-210ENST00000572205 CCDC170Q8IYT3 715 aa8.78□□□□□ -1
SMG6-210ENST00000572205 RGL4Q8IZJ4 473 aa8.78□□□□□ -1
SMG6-210ENST00000572205 LZTR1Q8N653 840 aa8.78□□□□□ -1
SMG6-210ENST00000572205 PLPP7Q8NBV4 271 aa8.78□□□□□ -1
SMG6-210ENST00000572205 SNX19Q92543 992 aa8.78□□□□□ -1
SMG6-210ENST00000572205 KRT35Q92764 455 aa8.78□□□□□ -1
SMG6-210ENST00000572205 MRRFQ96E11 262 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 BMFQ96LC9 184 aa8.78□□□□□ -1
SMG6-210ENST00000572205 KLHL32Q96NJ5 620 aa8.78□□□□□ -1
SMG6-210ENST00000572205 ZNF599Q96NL3 588 aa8.78□□□□□ -1
SMG6-210ENST00000572205 CAMK1GQ96NX5 476 aa8.78□□□□□ -1
SMG6-210ENST00000572205 RNF157Q96PX1 679 aa8.78□□□□□ -1
SMG6-210ENST00000572205 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
SMG6-210ENST00000572205 NUSAP1Q9BXS6 441 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 OSBPL1AQ9BXW6 950 aa8.78□□□□□ -1
SMG6-210ENST00000572205 MIR1-1HGQ9H1L0 117 aa8.78□□□□□ -1
SMG6-210ENST00000572205 DEF6Q9H4E7 631 aa8.78□□□□□ -1
SMG6-210ENST00000572205 TRIM10Q9UDY6 481 aa8.78□□□□□ -1
SMG6-210ENST00000572205 NCKAP1Q9Y2A7 1128 aa8.78□□□□□ -1
SMG6-210ENST00000572205 ANKRD6Q9Y2G4 727 aa8.78□□□□□ -1
SMG6-210ENST00000572205 PCDHA13Q9Y5I0 950 aa8.78□□□□□ -1
SMG6-210ENST00000572205 ANKRD11Q6UB99 2663 aaPredicted RBP8.77□□□□□ -1
SMG6-210ENST00000572205 A0A1B0GTQ1 180 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 POM121BA6NF01 834 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 DFFAO00273 331 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 KRIT1O00522 736 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 POP4O95707 220 aaKnown RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 MMP2P08253 660 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ADRB1P08588 477 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ZNF16P17020 682 aaPredicted RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 LHCGRP22888 699 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 PMLP29590 882 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 IGFALSP35858 605 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 GJC1P36383 396 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ARL4AP40617 200 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMG6-210ENST00000572205 TRAF2Q12933 501 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ZBTB17Q13105 803 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 RFTN1Q14699 578 aaPredicted RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 LBRQ14739 615 aaKnown RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 AGERQ15109 404 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 PDK2Q15119 407 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 PPM1JQ5JR12 505 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 KCTD16Q68DU8 428 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 BRICD5Q6PL45 260 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 MFSD7Q6UXD7 560 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 GDPD4Q6W3E5 623 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 DGLUCYQ7Z3D6 616 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 LAPTM4BQ86VI4 370 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 CAMK1DQ8IU85 385 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 PELI3Q8N2H9 469 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 CNTD1Q8N815 330 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 TP53I13Q8NBR0 393 aaPredicted RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 TPCN2Q8NHX9 752 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ARRDC2Q8TBH0 407 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 TADA1Q96BN2 335 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 HDAC11Q96DB2 347 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 CCDC114Q96M63 670 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 TSGA13Q96PP4 275 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 SMIM14Q96QK8 99 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ZDHHC5Q9C0B5 715 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 ZNHIT6Q9NWK9 470 aaKnown RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 LCMT1Q9UIC8 334 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 TPX2Q9ULW0 747 aaKnown RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 DMTF1Q9Y222 760 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
SMG6-210ENST00000572205 PKD1L2Q7Z442 2459 aa8.77□□□□□ -1.01
SMG6-210ENST00000572205 LOC400499M0QZD8 3231 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 ASXL3Q9C0F0 2248 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 GRID2IPA4D2P6 1211 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 TMEM110-MUSTN1A8MSY1 372 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 KCNK3O14649 394 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PSTPIP1O43586 416 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PCDHGA12O60330 932 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PRLP01236 227 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PRKCGP05129 697 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 HLA-DQB2P05538 268 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 KRT7P08729 469 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 TPM1P09493 284 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 GNSP15586 552 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PECAM1P16284 738 aaPredicted RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 JUNDP17535 347 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 DESP17661 470 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms