RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IQCKQ8N0W5 287 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 GPD1LQ8N335 351 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 ST6GALNAC3Q8NDV1 305 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 CHDHQ8NE62 594 aaPredicted RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 CCDC112Q8NEF3 446 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 UBE2Q2Q8WVN8 375 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 MYEOVQ96EZ4 313 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 C14orf79Q96F83 325 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 ACCSQ96QU6 501 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 SCAND2PQ9GZW5 306 aaPredicted RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 SDCBP2Q9H190 292 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 APMAPQ9HDC9 416 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 SFMBT1Q9UHJ3 866 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 USP3Q9Y6I4 520 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 RPS6KL1Q9Y6S9 549 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 HIVEP2P31629 2446 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 TRPM6Q9BX84 2022 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 ZANQ9Y493 2812 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 ZNF233A6NK53 670 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 F5H423 210 aaPredicted RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 M0QYT0 321 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 MCF2LO15068 1137 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 BNIP3LO60238 219 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 DPM1O60762 260 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 STK17BO94768 372 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CPNE6O95741 557 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 LATS1O95835 1130 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 PNLIPP16233 465 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 GLB1P16278 677 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 THOP1P52888 689 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 RAB15P59190 212 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 PFN3P60673 137 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 RPS24P62847 133 aaKnown RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 PPARDQ03181 441 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CCDC15Q0P6D6 951 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 ARHGEF7Q14155 803 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 ELOCQ15369 112 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 ACCSLQ4AC99 568 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 TMEM119Q4V9L6 283 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CERCAMQ5T4B2 595 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 LVRNQ6Q4G3 990 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CLEC9AQ6UXN8 241 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 MRGPRGQ86SM5 289 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 GAS2L3Q86XJ1 694 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CBWD2Q8IUF1 395 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 SYCP3Q8IZU3 236 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CRYBG2Q8N1P7 616 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 ARHGAP18Q8N392 663 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 FSTL5Q8N475 847 aaPredicted RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 FAM184AQ8NB25 1140 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 HJURPQ8NCD3 748 aaPredicted RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 AGBL5Q8NDL9 886 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 GPR156Q8NFN8 814 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 FBXO18Q8NFZ0 1043 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 INPP5DQ92835 1189 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 ELMO3Q96BJ8 720 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 KLF6Q99612 283 aaPredicted RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 C2orf49Q9BVC5 232 aaPredicted RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 NUDT9Q9BW91 350 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 XYLT2Q9H1B5 865 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 PNPLA8Q9NP80 782 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 PCDH12Q9NPG4 1184 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 CCM2LQ9NUG4 571 aaPredicted RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 TMEM63CQ9P1W3 806 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 LRIT1Q9P2V4 623 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 HMGXB4Q9UGU5 601 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 SERTAD1Q9UHV2 236 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 HBS1LQ9Y450 684 aaKnown RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 ZNF451Q9Y4E5 1061 aa7.02□□□□□ -1.29
CHD3-213ENST00000571249 COPG1Q9Y678 874 aaKnown RBP7.02□□□□□ -1.29
CHD3-213ENST00000571249 FER1L5A0AVI2 2057 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 ARGFXA6NJG6 315 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 KPNA3O00505 521 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 E2F3O00716 465 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 ALOX15BO15296 676 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 INPP4BO15327 924 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 IRAK2O43187 625 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 MSI1O43347 362 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 GADD45BO75293 160 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 LETM1O95202 739 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 CTSLP07711 333 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 ALPIP09923 528 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 DLATP10515 647 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 CTSEP14091 401 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 TNNI1P19237 187 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 ATICP31939 592 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 EPHA4P54764 986 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 RPS21P63220 83 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 FOXM1Q08050 763 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 SGCGQ13326 291 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 CDSNQ15517 529 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 FAM133BQ5BKY9 247 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 DCAF10Q5QP82 559 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 NKAIN2Q5VXU1 208 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 CAVIN1Q6NZI2 390 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 Q6ZVU0 165 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 KCNMB4Q86W47 210 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 GKN2Q86XP6 184 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms