RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 B8ZZF3 427 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 PYCARD-AS1I3L0S3 204 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 J3KR12 359 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 APOL1O14791 398 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 KDELR3O43731 214 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SLC28A2O43868 658 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 MFSD11O43934 449 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SRPRAP08240 638 aaKnown RBP13.51□□□□□ -0.25
CCDC40-205ENST00000571028 C6P13671 934 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SERPINB6P35237 376 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 NDST2P52849 883 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 ARF5P84085 180 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SFSWAPQ12872 951 aaKnown RBP13.51□□□□□ -0.25
CCDC40-205ENST00000571028 ILKQ13418 452 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SERINC3Q13530 473 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 DLG2Q15700 870 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 PARP15Q460N3 678 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 ARHGAP40Q5TG30 622 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 KIAA0895LQ68EN5 471 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 NPNTQ6UXI9 565 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 ARHGAP12Q8IWW6 846 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-205ENST00000571028 PQLC3Q8N755 202 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 FAM71BQ8TC56 605 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 ALG3Q92685 438 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SLC6A18Q96N87 628 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 TNKS2Q9H2K2 1166 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 LRRC19Q9H756 370 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SP110Q9HB58 689 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 HEY1Q9Y5J3 304 aa13.51□□□□□ -0.25
CCDC40-205ENST00000571028 MIF4GDA9UHW6 222 aaKnown RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 DDX3YO15523 660 aaKnown RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 SMAD6O43541 496 aaKnown RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 SIN3BO75182 1162 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 WISP1O95388 367 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 PYGMP11217 842 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 SRCP12931 536 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 CETN2P41208 172 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 CDKN2BP42772 138 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 RPS14P62263 151 aaKnown RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 GBE1Q04446 702 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 SLC45A4Q5BKX6 768 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 TFDP3Q5H9I0 405 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 B4GALNT4Q76KP1 1039 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 RYBPQ8N488 228 aaPredicted RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 LZTR1Q8N653 840 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 EXD1Q8NHP7 514 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 SAP25Q8TEE9 199 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 FAF2Q96CS3 445 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 MYO19Q96H55 970 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 TMEM245Q9H330 911 aa13.5□□□□□ -0.25
CCDC40-205ENST00000571028 IPO11Q9UI26 975 aaKnown RBP13.5□□□□□ -0.25
CCDC40-205ENST00000571028 hCG_1818297A0A087WSY0 165 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 A0A1W2PPC4 97 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 CST8O60676 142 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 EPHA8P29322 1005 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-205ENST00000571028 SERPINH1P50454 418 aaKnown RBP13.49□□□□□ -0.25
CCDC40-205ENST00000571028 PEX5P50542 639 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 LY6DQ14210 128 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 PAFAH1B3Q15102 231 aaKnown RBP13.49□□□□□ -0.25
CCDC40-205ENST00000571028 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 AFMIDQ63HM1 303 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 Q6ZVU0 165 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 STK40Q8N2I9 435 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 ATPAF2Q8N5M1 289 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 TRIM58Q8NG06 486 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 TM6SF2Q9BZW4 377 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 CPNE5Q9HCH3 593 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-205ENST00000571028 UBA2Q9UBT2 640 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-205ENST00000571028 HECTD1Q9ULT8 2610 aa13.49□□□□□ -0.25
CCDC40-205ENST00000571028 MYO18BQ8IUG5 2567 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 EDDM13A0A1B0GTR0 161 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 LRRC72A6NJI9 287 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 KIF5CO60282 957 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 PRAMEF11O60813 436 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 RNASEH1O60930 286 aaKnown RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 ZFXP17010 805 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 CKMT2P17540 419 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 CD38P28907 300 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 RECQLP46063 649 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 RHOAP61586 193 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 ADCY2Q08462 1091 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 TFDP2Q14188 446 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 POM121L1PQ3SYA9 428 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms