RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 BCL2L1Q07817 233 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 ELP6Q0PNE2 266 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 SGCGQ13326 291 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 ZNF235Q14590 738 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 SUZ12Q15022 739 aaKnown RBP12.79□□□□□ -0.36
TVP23B-204ENST00000571018 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
TVP23B-204ENST00000571018 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 LRRC73Q5JTD7 316 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 PRAMEF14Q5SWL7 426 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 MARC1Q5VT66 337 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 ABI3BPQ7Z7G0 1075 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 BBS5Q8N3I7 341 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 PGBD5Q8N414 524 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 TEX26Q8N6G2 289 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 FAM174AQ8TBP5 190 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 FATE1Q969F0 183 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 BMFQ96LC9 184 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 NSMCE3Q96MG7 304 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 CAMK1GQ96NX5 476 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 TSGA13Q96PP4 275 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 LENG8Q96PV6 779 aaPredicted RBP12.79□□□□□ -0.36
TVP23B-204ENST00000571018 NUDCD1Q96RS6 583 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
TVP23B-204ENST00000571018 MYOCQ99972 504 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 FZD3Q9NPG1 666 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
TVP23B-204ENST00000571018 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 TFR2Q9UP52 801 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 HS3ST3A1Q9Y663 406 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 ALG6Q9Y672 507 aa12.79□□□□□ -0.36
TVP23B-204ENST00000571018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 RAD51BO15315 384 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 SPOPO43791 374 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 CBFA2T3O75081 653 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 THEGLP0DJG4 465 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 XPAP23025 273 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 CCNCP24863 283 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 MMP13P45452 471 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 RXRGP48443 463 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 CLDN2P57739 230 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 GBE1Q04446 702 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 SLC10A2Q12908 348 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 SHBQ15464 509 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 RALGPS1Q5JS13 557 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 CFAP58Q5T655 872 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 TIGD7Q6NT04 549 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 RAD9BQ6WBX8 426 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 GCNT7Q6ZNI0 430 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 ZSWIM9Q86XI8 627 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 OXR1Q8N573 874 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 DENND6BQ8NEG7 585 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 OR13H1Q8NG92 308 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 MAML1Q92585 1016 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 MGME1Q9BQP7 344 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 DTLQ9NZJ0 730 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 PCOLCE2Q9UKZ9 415 aa12.78□□□□□ -0.36
TVP23B-204ENST00000571018 ASCC3Q8N3C0 2202 aaKnown RBP12.78□□□□□ -0.36
TVP23B-204ENST00000571018 SPAARA0A1B0GVQ0 90 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 A0A1W2PQ67 120 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 RCCD1A6NED2 376 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 POM121BA6NF01 834 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 A6NNZ2 444 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 MATN3O15232 486 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 YKT6O15498 198 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 MMP20O60882 483 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 TM7SF2O76062 418 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 MAP3K6O95382 1288 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 KRT1P04264 644 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 MX2P20592 715 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 EMP3P54852 163 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 POLR2LP62875 67 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 FAM193AP78312 1265 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 TRIP6Q15654 476 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 KYAT3Q6YP21 454 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 GLRX5Q86SX6 157 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 DCP2Q8IU60 420 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 TMEM139Q8IV31 216 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 PLD5Q8N7P1 536 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 CXorf40AQ8TE69 158 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 RHBDD1Q8TEB9 315 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 SAP25Q8TEE9 199 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 SETD7Q8WTS6 366 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 CENPTQ96BT3 561 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 HDAC11Q96DB2 347 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 MAK16Q9BXY0 300 aaKnown RBP12.77□□□□□ -0.37
TVP23B-204ENST00000571018 GOLPH3Q9H4A6 298 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 NOD2Q9HC29 1040 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 PCDH12Q9NPG4 1184 aa12.77□□□□□ -0.37
TVP23B-204ENST00000571018 GPR27Q9NS67 375 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms