RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CYP2A13Q16696 494 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 SPRED1Q7Z699 444 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 NIM1KQ8IY84 436 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 TMEM130Q8N3G9 435 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 TAMM41Q96BW9 452 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 FBXL20Q96IG2 436 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 MRM3Q9HC36 420 aaKnown RBP15.54■□□□□ 0.08
SMG6-207ENST00000570756 TBC1D13Q9NVG8 400 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 SMPD3Q9NY59 655 aaPredicted RBP15.54■□□□□ 0.08
SMG6-207ENST00000570756 KIAA1522Q9P206 1035 aaPredicted RBP15.54■□□□□ 0.08
SMG6-207ENST00000570756 FZD10Q9ULW2 581 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 FIS1Q9Y3D6 152 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 TCAF1Q9Y4C2 921 aa15.54■□□□□ 0.08
SMG6-207ENST00000570756 GSTT2P0CG29 244 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 GSTT2BP0CG30 244 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 HDCP19113 662 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 CCT8P50990 548 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 RAB10P61026 200 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 STX1BP61266 288 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 RBP5P82980 135 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 GNA12Q03113 381 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 CCNYL2Q5T2Q4 361 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 LRRC71Q8N4P6 559 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 RNF139Q8WU17 664 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 HOPXQ9BPY8 73 aaPredicted RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 MRPL57Q9BQC6 102 aaKnown RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 MTG1Q9BT17 334 aaPredicted RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 MUC3BQ9H195 1237 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 POMKQ9H5K3 350 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 SCHIP1Q9P0W5 487 aaPredicted RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 OAZ3Q9UMX2 235 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 CORINQ9Y5Q5 1042 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 AP3B1O00203 1094 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 STAU1O95793 577 aaKnown RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 STMN1P16949 149 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 ATP5F1P24539 256 aaPredicted RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 ETFBP38117 255 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 TNFAIP2Q03169 654 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 TMEM132DQ14C87 1099 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 CERCAMQ5T4B2 595 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 TSTD2Q5T7W7 516 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 SEZ6LQ9BYH1 1024 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 GPN2Q9H9Y4 310 aaPredicted RBP15.53■□□□□ 0.08
SMG6-207ENST00000570756 ZFYVE28Q9HCC9 887 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 CHRAC1Q9NRG0 131 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMG6-207ENST00000570756 SFMBT1Q9UHJ3 866 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 PGAP2Q9UHJ9 254 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 PSME2Q9UL46 239 aa15.53■□□□□ 0.08
SMG6-207ENST00000570756 FAM149AA5PLN7 773 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 KCNK1O00180 336 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 ATP4BP51164 291 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 CXCL9Q07325 125 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 PAFAH1B3Q15102 231 aaKnown RBP15.52■□□□□ 0.08
SMG6-207ENST00000570756 CNSTQ6PJW8 725 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 ZNF773Q6PK81 442 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 PDZD4Q76G19 769 aaPredicted RBP15.52■□□□□ 0.08
SMG6-207ENST00000570756 SLC41A1Q8IVJ1 513 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 OFCC1Q8IZS5 231 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 REPS2Q8NFH8 660 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 CCDC126Q96EE4 140 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 SETD4Q9NVD3 440 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 DAPK2Q9UIK4 370 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 SBF1O95248 1867 aa15.52■□□□□ 0.08
SMG6-207ENST00000570756 PARP14Q460N5 1801 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 COL11A1P12107 1806 aaPredicted RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 PSME4Q14997 1843 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 KRBA1A5PL33 1030 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 FARP2O94887 1054 aaPredicted RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 CLIC3O95833 236 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 GPIP06744 558 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 HNRNPLP14866 589 aaKnown RBP eCLIP15.52■□□□□ 0.073e-10■■■■□ 26.4
SMG6-207ENST00000570756 JUNBP17275 347 aaPredicted RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 UBA1P22314 1058 aaKnown RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 PTPN3P26045 913 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 LCN8Q6JVE9 175 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 ACOT1Q86TX2 421 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 IGFN1Q86VF2 1251 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 FAM131BQ86XD5 332 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 MINDY2Q8NBR6 621 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 TXNDC5Q8NBS9 432 aaKnown RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 NETO2Q8NC67 525 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 NXNL1Q96CM4 212 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 MYRFLQ96LU7 910 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 ZNF347Q96SE7 839 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 OMDQ99983 421 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 MAF1Q9H063 256 aa15.52■□□□□ 0.07
SMG6-207ENST00000570756 TSPYL2Q9H2G4 693 aaPredicted RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 ZNF214Q9UL59 606 aaPredicted RBP15.52■□□□□ 0.07
SMG6-207ENST00000570756 EI24O14681 340 aa15.51■□□□□ 0.07
SMG6-207ENST00000570756 KDM1AO60341 852 aa15.51■□□□□ 0.07
SMG6-207ENST00000570756 TPST1O60507 370 aa15.51■□□□□ 0.07
SMG6-207ENST00000570756 SEC14L2O76054 403 aa15.51■□□□□ 0.07
SMG6-207ENST00000570756 EIF2S1P05198 315 aaKnown RBP15.51■□□□□ 0.07
SMG6-207ENST00000570756 MBL2P11226 248 aaPredicted RBP15.51■□□□□ 0.07
SMG6-207ENST00000570756 IREB2P48200 963 aaKnown RBP15.51■□□□□ 0.07
SMG6-207ENST00000570756 PRPSAP1Q14558 356 aa15.51■□□□□ 0.07
SMG6-207ENST00000570756 SNX17Q15036 470 aa15.51■□□□□ 0.07
SMG6-207ENST00000570756 OXA1LQ15070 435 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms