RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 TP53I13Q8NBR0 393 aaPredicted RBP21.3■■□□□ 1
PKD1-240ENST00000570253 TTC9Q92623 222 aa21.3■■□□□ 1
PKD1-240ENST00000570253 CCNL2Q96S94 520 aaPredicted RBP21.3■■□□□ 1
PKD1-240ENST00000570253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.3■■□□□ 1
PKD1-240ENST00000570253 EDEM3Q9BZQ6 932 aa21.3■■□□□ 1
PKD1-240ENST00000570253 CATSPERBQ9H7T0 1116 aa21.3■■□□□ 1
PKD1-240ENST00000570253 SIRPGQ9P1W8 387 aa21.3■■□□□ 1
PKD1-240ENST00000570253 MFHAS1Q9Y4C4 1052 aa21.3■■□□□ 1
PKD1-240ENST00000570253 DAAM1Q9Y4D1 1078 aa21.3■■□□□ 1
PKD1-240ENST00000570253 CFAP46Q8IYW2 2715 aa21.3■■□□□ 1
PKD1-240ENST00000570253 ASH1LQ9NR48 2969 aaKnown RBP21.3■■□□□ 1
PKD1-240ENST00000570253 C2CD4BA6NLJ0 364 aa21.29■■□□□ 1
PKD1-240ENST00000570253 FAM72CH0Y354 149 aa21.29■■□□□ 1
PKD1-240ENST00000570253 PLD2O14939 933 aa21.29■■□□□ 1
PKD1-240ENST00000570253 CYP1A1P04798 512 aaPredicted RBP21.29■■□□□ 1
PKD1-240ENST00000570253 GPD1P21695 349 aa21.29■■□□□ 1
PKD1-240ENST00000570253 IRF4Q15306 451 aa21.29■■□□□ 1
PKD1-240ENST00000570253 FAM72AQ5TYM5 149 aa21.29■■□□□ 1
PKD1-240ENST00000570253 FAM72DQ6L9T8 149 aa21.29■■□□□ 1
PKD1-240ENST00000570253 DPY19L2P1Q6NXN4 242 aa21.29■■□□□ 1
PKD1-240ENST00000570253 ENPP7Q6UWV6 458 aa21.29■■□□□ 1
PKD1-240ENST00000570253 RD3Q7Z3Z2 195 aa21.29■■□□□ 1
PKD1-240ENST00000570253 PHLDB2Q86SQ0 1253 aa21.29■■□□□ 1
PKD1-240ENST00000570253 FAM72BQ86X60 149 aa21.29■■□□□ 1
PKD1-240ENST00000570253 PAF1Q8N7H5 531 aa21.29■■□□□ 1
PKD1-240ENST00000570253 RTL3Q8N8U3 475 aaKnown RBP21.29■■□□□ 1
PKD1-240ENST00000570253 PCDH19Q8TAB3 1148 aa21.29■■□□□ 1
PKD1-240ENST00000570253 GPT2Q8TD30 523 aa21.29■■□□□ 1
PKD1-240ENST00000570253 HCAR2Q8TDS4 363 aa21.29■■□□□ 1
PKD1-240ENST00000570253 PRR11Q96HE9 360 aaPredicted RBP21.29■■□□□ 1
PKD1-240ENST00000570253 TMEM74Q96NL1 305 aa21.29■■□□□ 1
PKD1-240ENST00000570253 CPEB1Q9BZB8 566 aaKnown RBP21.29■■□□□ 1
PKD1-240ENST00000570253 CLPBQ9H078 707 aa21.29■■□□□ 1
PKD1-240ENST00000570253 MBNL1Q9NR56 388 aaKnown RBP21.29■■□□□ 1
PKD1-240ENST00000570253 KLQ9UEF7 1012 aa21.29■■□□□ 1
PKD1-240ENST00000570253 GPR34Q9UPC5 381 aa21.29■■□□□ 1
PKD1-240ENST00000570253 ATMQ13315 3056 aa21.28■■□□□ 1
PKD1-240ENST00000570253 GJB6O95452 261 aa21.28■■□□□ 1
PKD1-240ENST00000570253 CALB1P05937 261 aa21.28■■□□□ 1
PKD1-240ENST00000570253 INHBCP55103 352 aa21.28■■□□□ 1
PKD1-240ENST00000570253 NFATC4Q14934 902 aa21.28■■□□□ 1
PKD1-240ENST00000570253 PARP15Q460N3 678 aa21.28■■□□□ 1
PKD1-240ENST00000570253 TMEM52BQ4KMG9 183 aa21.28■■□□□ 1
PKD1-240ENST00000570253 FKBP15Q5T1M5 1219 aa21.28■■□□□ 1
PKD1-240ENST00000570253 SCYL2Q6P3W7 929 aa21.28■■□□□ 1
PKD1-240ENST00000570253 RAB11FIP2Q7L804 512 aa21.28■■□□□ 1
PKD1-240ENST00000570253 DNAAF5Q86Y56 855 aa21.28■■□□□ 1
PKD1-240ENST00000570253 CCDC185Q8N715 623 aa21.28■■□□□ 1
PKD1-240ENST00000570253 JOSD2Q8TAC2 188 aa21.28■■□□□ 1
PKD1-240ENST00000570253 SLC20A1Q8WUM9 679 aa21.28■■□□□ 1
PKD1-240ENST00000570253 CCDC74AQ96AQ1 378 aa21.28■■□□□ 1
PKD1-240ENST00000570253 ADAM22Q9P0K1 906 aa21.28■■□□□ 1
PKD1-240ENST00000570253 NOCTQ9UK39 431 aaKnown RBP21.28■■□□□ 1
PKD1-240ENST00000570253 SSUH2Q9Y2M2 353 aa21.28■■□□□ 1
PKD1-240ENST00000570253 COL27A1Q8IZC6 1860 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 A0A1W2PNU3 283 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 NTN3O00634 580 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 TNFP01375 233 aa21.27■■□□□ 1
PKD1-240ENST00000570253 JMJD7P0C870 316 aa21.27■■□□□ 1
PKD1-240ENST00000570253 TIMP2P16035 220 aa21.27■■□□□ 1
PKD1-240ENST00000570253 HDAC4P56524 1084 aa21.27■■□□□ 1
PKD1-240ENST00000570253 CLN3Q13286 438 aa21.27■■□□□ 1
PKD1-240ENST00000570253 DPCR1Q3MIW9 517 aa21.27■■□□□ 1
PKD1-240ENST00000570253 TCP11X2Q5H9J9 407 aa21.27■■□□□ 1
PKD1-240ENST00000570253 CT47A1Q5JQC4 288 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 KIAA1614Q5VZ46 1190 aa21.27■■□□□ 1
PKD1-240ENST00000570253 SLC30A5Q8TAD4 765 aa21.27■■□□□ 1
PKD1-240ENST00000570253 CENPIQ92674 756 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 CLSTN2Q9H4D0 955 aa21.27■■□□□ 1
PKD1-240ENST00000570253 SEPT10Q9P0V9 454 aa21.27■■□□□ 1
PKD1-240ENST00000570253 UBA2Q9UBT2 640 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 PCDHGA7Q9Y5G6 932 aa21.27■■□□□ 1
PKD1-240ENST00000570253 HEMK1Q9Y5R4 338 aaPredicted RBP21.27■■□□□ 1
PKD1-240ENST00000570253 RASA4BC9J798 803 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 D6RAR5 112 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 RASA4O43374 803 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 CREB3O43889 395 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 RPLP0P05388 317 aaKnown RBP21.26■□□□□ 0.99
PKD1-240ENST00000570253 KELP23276 732 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 SOX5P35711 763 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 STAT1P42224 750 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 AIF1P55008 147 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 SRP54P61011 504 aaKnown RBP21.26■□□□□ 0.99
PKD1-240ENST00000570253 POLR2FP61218 127 aaKnown RBP21.26■□□□□ 0.99
PKD1-240ENST00000570253 FMO1Q01740 532 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 RAB6CQ53S08 254 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 BRAT1Q6PJG6 821 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 KYQ8NBH2 561 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 TSACCQ96A04 125 aaPredicted RBP21.26■□□□□ 0.99
PKD1-240ENST00000570253 COL26A1Q96A83 441 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 HMCESQ96FZ2 354 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 WDR92Q96MX6 357 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 ARHGAP9Q9BRR9 750 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 APOOQ9BUR5 198 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 RAB6CQ9H0N0 254 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 SUV39H2Q9H5I1 410 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 SEPT11Q9NVA2 429 aaKnown RBP21.26■□□□□ 0.99
PKD1-240ENST00000570253 TAB2Q9NYJ8 693 aa21.26■□□□□ 0.99
PKD1-240ENST00000570253 ATXN7L1Q9ULK2 861 aaPredicted RBP21.26■□□□□ 0.99
PKD1-240ENST00000570253 COQ6Q9Y2Z9 468 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms